C3H67_ORYSJ
ID C3H67_ORYSJ Reviewed; 619 AA.
AC Q2QPW2; A0A0N7KU42;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Zinc finger CCCH domain-containing protein 67;
DE Short=OsC3H67;
GN OrderedLocusNames=Os12g0515500, LOC_Os12g33090;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RG The rice full-length cDNA consortium;
RT "Oryza sativa full length cDNA.";
RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NOMENCLATURE.
RX PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL BMC Genomics 9:44-44(2008).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; DP000011; ABA98705.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF29905.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT17370.1; -; Genomic_DNA.
DR EMBL; AK287452; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015620786.1; XM_015765300.1.
DR AlphaFoldDB; Q2QPW2; -.
DR SMR; Q2QPW2; -.
DR STRING; 4530.OS12T0515500-01; -.
DR iPTMnet; Q2QPW2; -.
DR PaxDb; Q2QPW2; -.
DR PRIDE; Q2QPW2; -.
DR EnsemblPlants; Os12t0515500-01; Os12t0515500-01; Os12g0515500.
DR GeneID; 4352343; -.
DR Gramene; Os12t0515500-01; Os12t0515500-01; Os12g0515500.
DR KEGG; osa:4352343; -.
DR eggNOG; KOG1595; Eukaryota.
DR HOGENOM; CLU_015068_1_0_1; -.
DR InParanoid; Q2QPW2; -.
DR OMA; GSANHRE; -.
DR OrthoDB; 372844at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR Genevisible; Q2QPW2; OS.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0060255; P:regulation of macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0051171; P:regulation of nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR Gene3D; 1.25.40.20; -; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR045234; Unkempt-like.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR14493; PTHR14493; 2.
DR Pfam; PF00023; Ank; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF48403; SSF48403; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 1.
DR PROSITE; PS50088; ANK_REPEAT; 1.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 2: Evidence at transcript level;
KW ANK repeat; DNA-binding; Metal-binding; Reference proteome; Repeat; Zinc;
KW Zinc-finger.
FT CHAIN 1..619
FT /note="Zinc finger CCCH domain-containing protein 67"
FT /id="PRO_0000346858"
FT REPEAT 52..81
FT /note="ANK 1"
FT REPEAT 88..120
FT /note="ANK 2"
FT ZN_FING 213..241
FT /note="C3H1-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT ZN_FING 249..273
FT /note="C3H1-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 308..341
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 619 AA; 64726 MW; 1ABACFDBE333217E CRC64;
MGEPGGAEAA VSARLLELAA DDNAAGLGEL LAAWPSLADE PAPWYTPARG AEPLTPLMVA
AVYGSVGCLD ALLSPPYLVD PNRASASSLS TPLHLAAAGG SASAPAAVSR LLAAGADPAL
LDHLQRRASD LVALPPNSLP LKNHLLSLLG ARKEWPPDPS LPDIKNGAYA SDDFRMYSFK
VRACSRAYSH DWTECPFVHP GENARRRDPR KYHYSCVPCP EFKKGAGCRR GDMCEYAHGV
FESWLHPAQY RTRLCKDGVG CARRVCFFAH TPDELRPLYV STGSAVPSPR GALEMAAAAA
AMGMGLSSPG SSSFTPPLSP SAGGGGGGGG GSGGGGAWPQ QPSVPALCLP GSAGNLHLSR
LRTSLSARDM AVDELLAAAA AAADYDGLVA SPASIRSARG KALVPSNLDE LFSAELAAAA
ASRSPRYADQ GGAAFSPTRK ATVLNQFQLQ QQHSLLSPRA AAVTPEPVSP MSSRLLAALA
QREKMQQQTL RSMSSRDLGN AASLLVGSPV SSSMSKWGFP SGNPDWGADD EELGRLKRCS
SFELRSGAAN GNHEPDLSWV NTLVKEPTPE KMMTTTSAMD SIGILGQNTS RDHIVGGEDD
TAGVISSWLE QLQLDEMVV