C3H68_ARATH
ID C3H68_ARATH Reviewed; 449 AA.
AC Q9FH61;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Zinc finger CCCH domain-containing protein 68;
DE Short=AtC3H68;
GN OrderedLocusNames=At5g66270; ORFNames=K1L20.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NOMENCLATURE.
RX PubMed=18221561; DOI=10.1186/1471-2164-9-44;
RA Wang D., Guo Y., Wu C., Yang G., Li Y., Zheng C.;
RT "Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.";
RL BMC Genomics 9:44-44(2008).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB022211; BAB10706.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98193.1; -; Genomic_DNA.
DR EMBL; AK117637; BAC42293.1; -; mRNA.
DR EMBL; BT005171; AAO50704.1; -; mRNA.
DR RefSeq; NP_201428.1; NM_126025.3.
DR AlphaFoldDB; Q9FH61; -.
DR SMR; Q9FH61; -.
DR BioGRID; 22001; 3.
DR IntAct; Q9FH61; 3.
DR STRING; 3702.AT5G66270.1; -.
DR PaxDb; Q9FH61; -.
DR PRIDE; Q9FH61; -.
DR EnsemblPlants; AT5G66270.1; AT5G66270.1; AT5G66270.
DR GeneID; 836759; -.
DR Gramene; AT5G66270.1; AT5G66270.1; AT5G66270.
DR KEGG; ath:AT5G66270; -.
DR Araport; AT5G66270; -.
DR TAIR; locus:2155026; AT5G66270.
DR eggNOG; ENOG502QUGU; Eukaryota.
DR HOGENOM; CLU_023896_0_0_1; -.
DR InParanoid; Q9FH61; -.
DR OMA; HIPRIKW; -.
DR OrthoDB; 1017624at2759; -.
DR PhylomeDB; Q9FH61; -.
DR PRO; PR:Q9FH61; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FH61; baseline and differential.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR000571; Znf_CCCH.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..449
FT /note="Zinc finger CCCH domain-containing protein 68"
FT /id="PRO_0000372017"
FT ZN_FING 400..427
FT /note="C3H1-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 335..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..355
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 449 AA; 49442 MW; 82B4CF4368942269 CRC64;
MMKKTKKGRV SWASDSMLCQ VKLFLSDDCP VKVASNLPPG FEATDYATKR IISHIPRIKW
KRPPLFVLDD ALLVGSGGKS IETRSENLRI SKVLEAFYPH RSVIPSRPSL TLAVEEEHYD
DGKTPNIPLT HVEDERDAAA ESSHSFEAPA AVSGLGPELS LLASAALSAL TKEQGSQVDP
DLLVKLLSDP KIVENLINGM KGKPLETANN SLNTDITEPR LAPQHVTSTT MDRNPPPMPG
NVAPHNVPVS VQSSATDPPL PKPNQPMSSA LSMNLTLQKP TPVVHNYPLS SGIKVEDSYT
AAPLKPSTGD DVVVSEQKTQ LLFPCSSWNM NKVPESARTE TDPQIRNGNT NRDDQVSAKP
VKDLDYFKNL IREHGAVKPA TTETNNYKGR VDHKKIVKVR IQKPCMYFNR PKGCRMGESC
LYLHDSSKRL WTDVAPPHFP RAKRLKFGS