TSN1_BOVIN
ID TSN1_BOVIN Reviewed; 241 AA.
AC Q3T0S3;
DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Tetraspanin-1;
DE Short=Tspan-1;
GN Name=TSPAN1;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Crossbred X Angus; TISSUE=Ileum;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Lysosome membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the tetraspanin (TM4SF) family. {ECO:0000305}.
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DR EMBL; BC102280; AAI02281.1; -; mRNA.
DR RefSeq; NP_001029442.1; NM_001034270.1.
DR AlphaFoldDB; Q3T0S3; -.
DR SMR; Q3T0S3; -.
DR STRING; 9913.ENSBTAP00000017715; -.
DR PaxDb; Q3T0S3; -.
DR Ensembl; ENSBTAT00000017715; ENSBTAP00000017715; ENSBTAG00000013320.
DR GeneID; 506550; -.
DR KEGG; bta:506550; -.
DR CTD; 10103; -.
DR VEuPathDB; HostDB:ENSBTAG00000013320; -.
DR VGNC; VGNC:36425; TSPAN1.
DR eggNOG; KOG3882; Eukaryota.
DR GeneTree; ENSGT00940000158851; -.
DR HOGENOM; CLU_055524_4_1_1; -.
DR InParanoid; Q3T0S3; -.
DR OMA; HKESKCL; -.
DR OrthoDB; 1406848at2759; -.
DR TreeFam; TF352892; -.
DR Proteomes; UP000009136; Chromosome 3.
DR Bgee; ENSBTAG00000013320; Expressed in abomasum and 78 other tissues.
DR GO; GO:0030054; C:cell junction; IEA:Ensembl.
DR GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
DR GO; GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:Ensembl.
DR GO; GO:0031982; C:vesicle; IEA:Ensembl.
DR GO; GO:0050821; P:protein stabilization; IEA:Ensembl.
DR Gene3D; 1.10.1450.10; -; 1.
DR InterPro; IPR018499; Tetraspanin/Peripherin.
DR InterPro; IPR000301; Tetraspanin_animals.
DR InterPro; IPR018503; Tetraspanin_CS.
DR InterPro; IPR008952; Tetraspanin_EC2_sf.
DR PANTHER; PTHR19282; PTHR19282; 1.
DR Pfam; PF00335; Tetraspanin; 1.
DR PIRSF; PIRSF002419; Tetraspanin; 1.
DR SUPFAM; SSF48652; SSF48652; 1.
DR PROSITE; PS00421; TM4_1; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Lysosome; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..241
FT /note="Tetraspanin-1"
FT /id="PRO_0000247132"
FT TOPO_DOM 1..11
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 33..52
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 53..73
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 74..88
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 89..109
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 110..211
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 212..232
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 233..241
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CARBOHYD 141
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 154
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 167
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 180
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 189
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 194
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 241 AA; 26208 MW; FB1D7902F95B8D5F CRC64;
MGCFNFIKVM MILFNMLIFL CGAALLAVGI WVSVDGPSFV KIFGPMSSSA MQFVNVGYFL
IAAGAVLFAL GFLGCYGAQT ESKCALMTFF FILLLIFIAE VAAAVVALVY TTLAENFLTA
VVVPNIKKEY GSQKDFTQVW NSTMAGLKCC GFTNYTDFEG SPYVRKNGTF PPYCCYDSVN
NSFMEPCNNF TAHNMSVQGC FKQLLYDIRT NAVTVGGVAA GIGGLELAAM IVSMYLYCNL
E