TSN5_RAT
ID TSN5_RAT Reviewed; 268 AA.
AC Q68VK5; Q498N9;
DT 23-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT 15-MAY-2007, sequence version 2.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Tetraspanin-5;
DE Short=Tspan-5;
DE AltName: Full=Transmembrane 4 superfamily member 9;
GN Name=Tspan5; Synonyms=Tm4sf9;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=Wistar; TISSUE=Brain;
RA Braeuer A.U., Savaskan N.E., Ninnemann O., Nitsch R.;
RT "Tetraspanin-5 is upregulated after lesion in the hippocampus.";
RL Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Regulates ADAM10 maturation and trafficking to the cell
CC surface. Promotes ADAM10-mediated cleavage of CD44.
CC {ECO:0000250|UniProtKB:P62079, ECO:0000250|UniProtKB:P62080}.
CC -!- SUBUNIT: Interacts with ADAM10. {ECO:0000250|UniProtKB:P62080}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:P62079};
CC Multi-pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the tetraspanin (TM4SF) family. {ECO:0000305}.
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DR EMBL; AF540877; AAQ11226.1; -; mRNA.
DR EMBL; BC100135; AAI00136.1; -; mRNA.
DR RefSeq; NP_001004090.2; NM_001004090.2.
DR AlphaFoldDB; Q68VK5; -.
DR SMR; Q68VK5; -.
DR STRING; 10116.ENSRNOP00000021381; -.
DR GlyGen; Q68VK5; 4 sites.
DR PhosphoSitePlus; Q68VK5; -.
DR PaxDb; Q68VK5; -.
DR Ensembl; ENSRNOT00000021381; ENSRNOP00000021381; ENSRNOG00000015913.
DR GeneID; 362048; -.
DR KEGG; rno:362048; -.
DR CTD; 10098; -.
DR RGD; 1303176; Tspan5.
DR eggNOG; KOG3882; Eukaryota.
DR GeneTree; ENSGT00940000161376; -.
DR HOGENOM; CLU_055524_0_2_1; -.
DR InParanoid; Q68VK5; -.
DR OMA; RECAWDE; -.
DR OrthoDB; 1180379at2759; -.
DR PhylomeDB; Q68VK5; -.
DR TreeFam; TF313002; -.
DR PRO; PR:Q68VK5; -.
DR Proteomes; UP000002494; Chromosome 2.
DR Bgee; ENSRNOG00000015913; Expressed in frontal cortex and 19 other tissues.
DR Genevisible; Q68VK5; RN.
DR GO; GO:0016021; C:integral component of membrane; TAS:RGD.
DR GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; ISO:RGD.
DR GO; GO:0019899; F:enzyme binding; ISO:RGD.
DR GO; GO:0007155; P:cell adhesion; TAS:RGD.
DR GO; GO:0008283; P:cell population proliferation; TAS:RGD.
DR GO; GO:0045747; P:positive regulation of Notch signaling pathway; ISO:RGD.
DR GO; GO:0072659; P:protein localization to plasma membrane; ISO:RGD.
DR GO; GO:0051604; P:protein maturation; ISO:RGD.
DR Gene3D; 1.10.1450.10; -; 1.
DR InterPro; IPR018499; Tetraspanin/Peripherin.
DR InterPro; IPR000301; Tetraspanin_animals.
DR InterPro; IPR018503; Tetraspanin_CS.
DR InterPro; IPR008952; Tetraspanin_EC2_sf.
DR PANTHER; PTHR19282; PTHR19282; 1.
DR Pfam; PF00335; Tetraspanin; 1.
DR PIRSF; PIRSF002419; Tetraspanin; 1.
DR SUPFAM; SSF48652; SSF48652; 1.
DR PROSITE; PS00421; TM4_1; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..268
FT /note="Tetraspanin-5"
FT /id="PRO_0000219245"
FT TOPO_DOM 1..17
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 18..38
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 39..61
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 62..82
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 83..92
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 93..113
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 114..232
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 233..253
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 254..268
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CARBOHYD 49
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 169
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 174
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 232
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CONFLICT 142
FT /note="N -> S (in Ref. 1; AAQ11226)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 268 AA; 30337 MW; 7F4480BD0FA6192D CRC64;
MSGKHYKGPE VSCCIKYFIF GFNVIFWFLG ITFLGIGLWA WNEKGVLSNI SSITDLGGFD
PVWLFLVVGG VMFILGFAGC IGALRENTFL LKFFSVFLGI IFFLELTAGV LAFVFKDWIK
DQLYFFINNN IRAYRDDIDL QNLIDFTQEY WQCCGAFGAD DWNLNIYFNC TDSNASRERC
GVPFSCCTKD PAEDVINTQC GYDARQKPEV DQQIVIYTKG CVPQFEKWLQ DNLTIVAGIF
IGIALLQIFG ICLAQNLVSD IEAVRASW