TSN9_SALSA
ID TSN9_SALSA Reviewed; 239 AA.
AC B5X3I6;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 03-AUG-2022, entry version 45.
DE RecName: Full=Tetraspanin-9;
DE Short=Tspan-9;
GN Name=tspan9;
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Thymus;
RX PubMed=20433749; DOI=10.1186/1471-2164-11-279;
RA Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M.,
RA Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S.,
RA Koop B.F.;
RT "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in
RT evolutionary pressures on a post-tetraploidization genome.";
RL BMC Genomics 11:279-279(2010).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the tetraspanin (TM4SF) family. {ECO:0000305}.
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DR EMBL; BT045605; ACI33867.1; -; mRNA.
DR EMBL; BT057676; ACM09548.1; -; mRNA.
DR RefSeq; NP_001135116.1; NM_001141644.1.
DR RefSeq; XP_014008808.1; XM_014153333.1.
DR RefSeq; XP_014008809.1; XM_014153334.1.
DR RefSeq; XP_014008810.1; XM_014153335.1.
DR AlphaFoldDB; B5X3I6; -.
DR SMR; B5X3I6; -.
DR GeneID; 100196615; -.
DR KEGG; sasa:100196615; -.
DR CTD; 100305174; -.
DR OMA; WNAIQGE; -.
DR OrthoDB; 1224210at2759; -.
DR Proteomes; UP000087266; Chromosome ssa17.
DR Bgee; ENSSSAG00000057672; Expressed in nose and 16 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.10.1450.10; -; 1.
DR InterPro; IPR018499; Tetraspanin/Peripherin.
DR InterPro; IPR000301; Tetraspanin_animals.
DR InterPro; IPR018503; Tetraspanin_CS.
DR InterPro; IPR008952; Tetraspanin_EC2_sf.
DR PANTHER; PTHR19282; PTHR19282; 1.
DR Pfam; PF00335; Tetraspanin; 1.
DR PIRSF; PIRSF002419; Tetraspanin; 1.
DR SUPFAM; SSF48652; SSF48652; 1.
DR PROSITE; PS00421; TM4_1; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..239
FT /note="Tetraspanin-9"
FT /id="PRO_0000375884"
FT TOPO_DOM 1..12
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 13..33
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 34..55
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 56..76
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 77..85
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 86..106
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 107..203
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 204..224
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 225..239
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CARBOHYD 110
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 180
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 239 AA; 26676 MW; BACA56825DA1756A CRC64;
MARGCLCCVK YMLFLFNLLF WLGGCGLLGV GVWLSVSQGS FATLSPSFPS ISAANLIITL
GAVIMVTGFL GCLGAIKENK CLLLSFFITL LVILLAELIL LILFFVYTDN VSENARQDLK
EGLALYSTNN NAGLRNAWNT IQTEWHCCGV NGYTDWHTAL QEKVVPDHCC QDIYQDCGRN
ATNQFWTRGC YEKVEEWLDD NKHLLGTIAM CVLVIQLLGM AFSMTLYQQI HRSGKKYEA
