TSNAX_PONAB
ID TSNAX_PONAB Reviewed; 290 AA.
AC Q5RC21;
DT 26-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=Translin-associated protein X;
DE AltName: Full=Translin-associated factor X;
GN Name=TSNAX; Synonyms=TRAX;
OS Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pongo.
OX NCBI_TaxID=9601;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Heart;
RG The German cDNA consortium;
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Acts in combination with TSN as an endonuclease involved in
CC the activation of the RNA-induced silencing complex (RISC). Possible
CC role in spermatogenesis (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Ring-shaped heterooctamer of six TSN and two TSNAX subunits.
CC Interacts with GOLGA3, TSNAXIP1, SUN1 and AKAP9. Interacts with the
CC homodimeric form of C1D following gamma-radiation. Interacts with TSN
CC and C1D in a mutually exclusive manner (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, perinuclear region {ECO:0000250}.
CC Golgi apparatus. Nucleus {ECO:0000250}. Note=Expressed in the cytoplasm
CC in the presence of TSN. Accumulate in the Golgi complex of mid-late
CC pachytene spermatocytes (By similarity). {ECO:0000250}.
CC -!- PTM: Sumoylated with SUMO1. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the translin family. {ECO:0000305}.
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DR EMBL; CR858461; CAH90689.1; -; mRNA.
DR RefSeq; NP_001125379.1; NM_001131907.2.
DR AlphaFoldDB; Q5RC21; -.
DR SMR; Q5RC21; -.
DR STRING; 9601.ENSPPYP00000000113; -.
DR Ensembl; ENSPPYT00000000122; ENSPPYP00000000113; ENSPPYG00000000112.
DR GeneID; 100172282; -.
DR KEGG; pon:100172282; -.
DR CTD; 7257; -.
DR eggNOG; KOG3066; Eukaryota.
DR GeneTree; ENSGT00940000153568; -.
DR HOGENOM; CLU_067225_1_0_1; -.
DR InParanoid; Q5RC21; -.
DR OrthoDB; 1213910at2759; -.
DR TreeFam; TF323633; -.
DR Proteomes; UP000001595; Chromosome 1.
DR GO; GO:1902555; C:endoribonuclease complex; IEA:Ensembl.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0030422; P:siRNA processing; IEA:Ensembl.
DR GO; GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
DR Gene3D; 1.20.58.190; -; 1.
DR Gene3D; 1.20.58.200; -; 1.
DR InterPro; IPR016069; Translin_C.
DR InterPro; IPR002848; Translin_fam.
DR InterPro; IPR016068; Translin_N.
DR InterPro; IPR036081; Translin_sf.
DR PANTHER; PTHR10741; PTHR10741; 1.
DR Pfam; PF01997; Translin; 1.
DR SUPFAM; SSF74784; SSF74784; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Developmental protein; Differentiation; DNA-binding;
KW Golgi apparatus; Isopeptide bond; Magnesium; Metal-binding; Nucleus;
KW Reference proteome; Spermatogenesis; Ubl conjugation.
FT CHAIN 1..290
FT /note="Translin-associated protein X"
FT /id="PRO_0000191688"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 73..208
FT /note="Interaction with C1D"
FT /evidence="ECO:0000250"
FT COMPBIAS 7..27
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 129
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 197
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT CROSSLNK 279
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q99598"
SQ SEQUENCE 290 AA; 33112 MW; D38B0DD96B50C0B9 CRC64;
MSNKEGSGGF RKRKHDNFPH NQRREGKDVN SSSPVMLAFK SFQQELDARH DKYERLVKLS
RDITVESKRT IFLLHRITSA PDMEDILTES EIKLDGVRQK IFQVAQELSG EDMHQFHRAI
TTGLQEYVEA VSFQHFIKTR SLISMDEINK QLIFTTEDNG KENKTPSSDA QDKQFGTWRL
RVTPVDYLLG VADLTGELMR MCINSVGNGD IDTPFEVSQF LRQVYDGFSF IGNTGPYEVS
KKLYTLKQSL AKVENACYAL KVRGSEIPKH MLADVFSVKT EMIDQEEGIS