TSR1_CAEEL
ID TSR1_CAEEL Reviewed; 785 AA.
AC Q19329;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Pre-rRNA-processing protein TSR1 homolog;
GN Name=tag-151; ORFNames=F10G7.1;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Required during maturation of the 40S ribosomal subunit in
CC the nucleolus. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TRAFAC class translation factor GTPase
CC superfamily. Bms1-like GTPase family. TSR1 subfamily. {ECO:0000305}.
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DR EMBL; FO081114; CCD69203.1; -; Genomic_DNA.
DR PIR; C88131; C88131.
DR RefSeq; NP_494840.1; NM_062439.6.
DR AlphaFoldDB; Q19329; -.
DR SMR; Q19329; -.
DR BioGRID; 39166; 4.
DR STRING; 6239.F10G7.1.2; -.
DR EPD; Q19329; -.
DR PaxDb; Q19329; -.
DR PeptideAtlas; Q19329; -.
DR EnsemblMetazoa; F10G7.1.1; F10G7.1.1; WBGene00006497.
DR EnsemblMetazoa; F10G7.1.2; F10G7.1.2; WBGene00006497.
DR GeneID; 173812; -.
DR KEGG; cel:CELE_F10G7.1; -.
DR UCSC; F10G7.1.2; c. elegans.
DR CTD; 173812; -.
DR WormBase; F10G7.1; CE02624; WBGene00006497; tag-151.
DR eggNOG; KOG1980; Eukaryota.
DR GeneTree; ENSGT00940000153195; -.
DR HOGENOM; CLU_009858_1_0_1; -.
DR InParanoid; Q19329; -.
DR OMA; KTPHQQV; -.
DR OrthoDB; 186926at2759; -.
DR PhylomeDB; Q19329; -.
DR PRO; PR:Q19329; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00006497; Expressed in larva and 4 other tissues.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0030688; C:preribosome, small subunit precursor; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IBA:GO_Central.
DR GO; GO:0003924; F:GTPase activity; IBA:GO_Central.
DR GO; GO:0034511; F:U3 snoRNA binding; IBA:GO_Central.
DR GO; GO:0000479; P:endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR InterPro; IPR012948; AARP2CN.
DR InterPro; IPR039761; Bms1/Tsr1.
DR InterPro; IPR007034; BMS1_TSR1_C.
DR InterPro; IPR030387; G_Bms1/Tsr1_dom.
DR PANTHER; PTHR12858; PTHR12858; 1.
DR Pfam; PF08142; AARP2CN; 1.
DR Pfam; PF04950; RIBIOP_C; 1.
DR SMART; SM00785; AARP2CN; 1.
DR SMART; SM01362; DUF663; 1.
DR PROSITE; PS51714; G_BMS1; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..785
FT /note="Pre-rRNA-processing protein TSR1 homolog"
FT /id="PRO_0000311279"
FT DOMAIN 83..243
FT /note="Bms1-type G"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01051"
FT REGION 1..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 307..426
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 24..59
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..335
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 345..364
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 375..412
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 785 AA; 89221 MW; 1D40D32ED1263A45 CRC64;
MSTTGHRAGV FKKPSKPHKS WKGKRTKGEI TSENRGREGV KQLTRSAHST HRTISKDARR
NQLKMARDQK MADAMERRRT SNAPCLVTVV SLGVGARPTE FIKKLATCDE TIIQTTSPST
IDFAIPRFKS RVSFLTPDKD NVDGVLDAIR ASDVLCFLWP MSAELSEWDE QLLTIIKANG
LPTIVSVVPG LGSIANHKKK EDVRKGIEFI ISKWSMSNAG VMPADSVTDN LQLLRILNET
KKKPLTLQAR HSYMLVENLE CSDKTGETCT LVAQGYLRGP EWNANNLVHL PGFGDFQISK
IESTVDPHPL KAHNKTPEAQ IIAKSDDKRQ NTETEITPDS MDGEQTWPTR EELEEADKEL
RRVPKGTSSY QAAWILDDED DEDEEDSDED MDDSDNEEVE DDSEEEEPMD DLKSEAGETT
ASEMMFDDGI DEDINMAEVE KYRKERENAQ WPDEVDTPMD MPARIAFQKY RGLKSFRTST
WDPKENLPLD YARIFQFANY RNTKKNVMSK IGGNDVDADS VADKKFNGAF ASVFIENVPV
AVLEAYKDAK NLVLFQLLPH EHKMSVLNMV LKKHPSCTIP ITSDQNQKFI FYVGFRQFEA
NAVFSSNTPG DKFKLERFMP TEKTFVATVY APITFNPATV LCFRQDDKGR QELVATGSIL
DSNPDRIVLK RTVLAGHPYK INRRAVVVRY MFFNREDIEW FKPVELYTPS GRRGHIKEAV
GTHGNMKCRF DQQLNAQDSV MLNLYKRVFP VWNYSIFNRS LNPSRFVERS RVESISLVNE
DAMEE