TTC30_CAEBR
ID TTC30_CAEBR Reviewed; 657 AA.
AC A8XBR9;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 20-MAY-2008, sequence version 2.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=Tetratricopeptide repeat protein 30 homolog;
DE Short=TPR repeat protein 30 homolog;
DE AltName: Full=Abnormal dye filling protein 1;
GN Name=dyf-1; ORFNames=CBG10774;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Required for polyglutamylation of axonemal tubulin. Plays a
CC role in anterograde intraflagellar transport (IFT), the process by
CC which cilia precursors are transported from the base of the cilium to
CC the site of their incorporation at the tip. This protein is
CC specifically required for the kinesin osm-3 to dock onto and move the
CC IFT particles which contain these precursors. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell projection, cilium {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TTC30/dfy-1/fleer family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAP30085.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; HE600915; CAP30085.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_002639954.1; XM_002639908.1.
DR AlphaFoldDB; A8XBR9; -.
DR SMR; A8XBR9; -.
DR STRING; 6238.CBG10774; -.
DR EnsemblMetazoa; CBG10774a.1; CBG10774a.1; WBGene00032053.
DR GeneID; 8581948; -.
DR KEGG; cbr:CBG_10774; -.
DR CTD; 8581948; -.
DR WormBase; CBG10774a; CBP48406; WBGene00032053; Cbr-dyf-1.
DR eggNOG; KOG4340; Eukaryota.
DR HOGENOM; CLU_057443_0_0_1; -.
DR InParanoid; A8XBR9; -.
DR OrthoDB; 247838at2759; -.
DR Proteomes; UP000008549; Chromosome I.
DR GO; GO:0005879; C:axonemal microtubule; ISS:UniProtKB.
DR GO; GO:0005929; C:cilium; ISS:UniProtKB.
DR GO; GO:0030992; C:intraciliary transport particle B; IBA:GO_Central.
DR GO; GO:0120170; F:intraciliary transport particle B binding; IBA:GO_Central.
DR GO; GO:0042073; P:intraciliary transport; ISS:UniProtKB.
DR GO; GO:0018095; P:protein polyglutamylation; ISS:UniProtKB.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR039941; TT30.
DR PANTHER; PTHR20931; PTHR20931; 1.
DR Pfam; PF13174; TPR_6; 1.
DR SMART; SM00028; TPR; 4.
DR SUPFAM; SSF48452; SSF48452; 1.
DR PROSITE; PS50293; TPR_REGION; 2.
PE 3: Inferred from homology;
KW Cell projection; Cilium; Cilium biogenesis/degradation; Coiled coil;
KW Reference proteome; Repeat; TPR repeat.
FT CHAIN 1..657
FT /note="Tetratricopeptide repeat protein 30 homolog"
FT /id="PRO_0000333209"
FT REPEAT 9..42
FT /note="TPR 1"
FT REPEAT 43..76
FT /note="TPR 2"
FT REPEAT 141..174
FT /note="TPR 3"
FT REPEAT 175..208
FT /note="TPR 4"
FT REPEAT 238..271
FT /note="TPR 5"
FT REPEAT 384..417
FT /note="TPR 6"
FT REPEAT 418..449
FT /note="TPR 7"
FT REPEAT 451..484
FT /note="TPR 8"
FT REPEAT 537..570
FT /note="TPR 9"
SQ SEQUENCE 657 AA; 75715 MW; 2789315C7FA9AA64 CRC64;
MNAMLNIKEG EFTSTIYTLI HEHKFNDAIR ILQYQHERNP KNLAALSLLG YCYYYTQDFQ
NAADCYSQLS YNYPHHSQYK LYHAQALYHA FKPAEALNVV TTIQDDDLLN ESIKLEAAIK
YQEDDLVNCR ILVDQLPTDD ATVLINTACI DYKEGNYSEA LQKFNQATEF SGYQSGLAYS
IALCYYRRGD YNSSLQLISE IINRGIKDHP EFHIGMVTEG FDVNVVQNSM TLHESALIEA
FNLRFAIYYK TKDFKAAKEC LTDMPPRHEH DYDPVTLHNL AINTANTDFG DSSAKLQFLL
GSNPFPQETF ANLLFLYCKN DYFGLAADVL AENPHQSFYC LNEYQFNLLE ALIYMPTSPE
ESLKKLEKLD KECMTRLRKI AVEIQIKKEQ KTSDKDDSLE MRNLIESYED ELELYLPVLM
THAKYYWDKR DYLAVEKLFR ASNEYCNEHH TWKLNVAHTI FMQEKKYKEA ALFYEPIVNR
KYDGGILEIP AMVLANLVVC YIMTNQTDEA ESILKTVENA EENALMSNPN EKYFHNSIIS
LVIGSLYCSK GNFEFGMSRV VKALEPPEKK LGVDTWYYAK RCIVAAIEMM AKNILVMRDS
VVMEVIQFLS SCEIPGRNIY TVPDDLFEQA AESKVKCNVT YEARMLKAAL LTVFHGS