TTC36_DANRE
ID TTC36_DANRE Reviewed; 187 AA.
AC A8E7I5; Q5U3F6;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2007, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Tetratricopeptide repeat protein 36;
DE Short=TPR repeat protein 36;
GN Name=ttc36; ORFNames=si:rp71-52f21.2, zgc:103600;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Liver;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the TTC36 family. {ECO:0000305}.
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DR EMBL; BX322577; CAP09349.1; -; Genomic_DNA.
DR EMBL; BC085563; AAH85563.1; -; mRNA.
DR RefSeq; NP_001007389.1; NM_001007388.1.
DR AlphaFoldDB; A8E7I5; -.
DR SMR; A8E7I5; -.
DR STRING; 7955.ENSDARP00000017354; -.
DR PaxDb; A8E7I5; -.
DR Ensembl; ENSDART00000024768; ENSDARP00000017354; ENSDARG00000011693.
DR Ensembl; ENSDART00000191488; ENSDARP00000151482; ENSDARG00000011693.
DR GeneID; 492516; -.
DR KEGG; dre:492516; -.
DR CTD; 143941; -.
DR ZFIN; ZDB-GENE-041114-87; ttc36.
DR eggNOG; KOG4555; Eukaryota.
DR GeneTree; ENSGT00390000007968; -.
DR HOGENOM; CLU_1464567_0_0_1; -.
DR InParanoid; A8E7I5; -.
DR OMA; PYSALCN; -.
DR OrthoDB; 1597848at2759; -.
DR PhylomeDB; A8E7I5; -.
DR TreeFam; TF105820; -.
DR PRO; PR:A8E7I5; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 18.
DR Bgee; ENSDARG00000011693; Expressed in liver and 13 other tissues.
DR GO; GO:0060271; P:cilium assembly; IMP:ZFIN.
DR GO; GO:0061371; P:determination of heart left/right asymmetry; IMP:ZFIN.
DR GO; GO:0032474; P:otolith morphogenesis; IMP:ZFIN.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR038906; TTC36.
DR PANTHER; PTHR21405; PTHR21405; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; SSF48452; 1.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; TPR repeat.
FT CHAIN 1..187
FT /note="Tetratricopeptide repeat protein 36"
FT /id="PRO_0000332182"
FT REPEAT 47..80
FT /note="TPR 1"
FT REPEAT 82..114
FT /note="TPR 2"
FT REPEAT 119..152
FT /note="TPR 3"
FT CONFLICT 114
FT /note="K -> T (in Ref. 2; AAH85563)"
FT /evidence="ECO:0000305"
FT CONFLICT 134..136
FT /note="HDE -> RDG (in Ref. 2; AAH85563)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 187 AA; 20306 MW; A78F41AB2437ED6A CRC64;
MASAHDRAVL QAIFNPTSPI GDVPGLNQEE ELMDDDSAFD PELVKQVKDL ELQGVSSAES
GDLPAALQHF NQAISVLPQR ASAYNNRAQT KRLLGDTKGA VEDLEHAISL SNGKGRSACQ
ALVQRGLLLR LSGHDEEARL DFERAAALGS EFARQQAVIL NPYAALCNRM LSEVISKLRN
PEVSEMQ