TTDB_METJA
ID TTDB_METJA Reviewed; 195 AA.
AC Q58034;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Putative L(+)-tartrate dehydratase subunit beta {ECO:0000250|UniProtKB:P0AC35};
DE Short=L-TTD beta {ECO:0000250|UniProtKB:P0AC35};
DE EC=4.2.1.32 {ECO:0000250|UniProtKB:P0AC35};
GN OrderedLocusNames=MJ0617;
OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS 10045 / NBRC 100440) (Methanococcus jannaschii).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanocaldococcaceae; Methanocaldococcus.
OX NCBI_TaxID=243232;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT jannaschii.";
RL Science 273:1058-1073(1996).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2R,3R)-tartrate = H2O + oxaloacetate; Xref=Rhea:RHEA:15413,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:16452, ChEBI:CHEBI:30924; EC=4.2.1.32;
CC Evidence={ECO:0000250|UniProtKB:P0AC35};
CC -!- SUBUNIT: Heterotetramer of two alpha and two beta subunits.
CC {ECO:0000250|UniProtKB:P0AC35}.
CC -!- SIMILARITY: Belongs to the class-I fumarase family. {ECO:0000305}.
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DR EMBL; L77117; AAB98612.1; -; Genomic_DNA.
DR PIR; A64377; A64377.
DR RefSeq; WP_010870122.1; NC_000909.1.
DR PDB; 5DNI; X-ray; 2.30 A; A/B=1-179.
DR PDBsum; 5DNI; -.
DR AlphaFoldDB; Q58034; -.
DR SMR; Q58034; -.
DR STRING; 243232.MJ_0617; -.
DR EnsemblBacteria; AAB98612; AAB98612; MJ_0617.
DR GeneID; 1451483; -.
DR KEGG; mja:MJ_0617; -.
DR eggNOG; arCOG04406; Archaea.
DR HOGENOM; CLU_098588_0_0_2; -.
DR InParanoid; Q58034; -.
DR OMA; IYHCGPL; -.
DR OrthoDB; 88282at2157; -.
DR PhylomeDB; Q58034; -.
DR Proteomes; UP000000805; Chromosome.
DR GO; GO:0008730; F:L(+)-tartrate dehydratase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.20.130.10; -; 1.
DR InterPro; IPR004647; Fe-S_hydro-lyase_TtdB-typ_cat.
DR InterPro; IPR036660; Fe-S_hydroAse_TtdB_cat_sf.
DR Pfam; PF05683; Fumerase_C; 1.
DR SUPFAM; SSF117457; SSF117457; 1.
DR TIGRFAMs; TIGR00723; ttdB_fumA_fumB; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Lyase; Reference proteome.
FT CHAIN 1..195
FT /note="Putative L(+)-tartrate dehydratase subunit beta"
FT /id="PRO_0000195662"
FT ACT_SITE 36
FT /evidence="ECO:0000255"
FT BINDING 104
FT /ligand="substrate"
FT /evidence="ECO:0000255"
FT STRAND 2..7
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 10..15
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 21..30
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 33..44
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 57..59
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 64..68
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 71..76
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 82..85
FT /evidence="ECO:0007829|PDB:5DNI"
FT TURN 86..88
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 89..96
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 100..105
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 111..118
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 121..124
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 130..133
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 134..136
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 137..145
FT /evidence="ECO:0007829|PDB:5DNI"
FT HELIX 146..149
FT /evidence="ECO:0007829|PDB:5DNI"
FT TURN 151..153
FT /evidence="ECO:0007829|PDB:5DNI"
FT STRAND 154..170
FT /evidence="ECO:0007829|PDB:5DNI"
SQ SEQUENCE 195 AA; 21868 MW; A5FDEB0E77D00902 CRC64;
MEYTFNKLTK KDVKKLKVGD IVYLNGKIYT ARDEAHLKII EMLKSNEKLP FDLNESIIYH
AGPIMKKVND SWVCVSIGPT TSARMNDVEE EFIKLTNISA IVGKGGMKKE LLKTFEDYGV
VYLAAPGGCA ALLANSVKRV DNVYFLDELG MPEAVWELEV NNFGPLIVAM DSHGNSIYEE
VNKKVYEKLN ELIGL