TTDR_ECOL6
ID TTDR_ECOL6 Reviewed; 310 AA.
AC Q8FDH0;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2006, sequence version 2.
DT 25-MAY-2022, entry version 108.
DE RecName: Full=HTH-type transcriptional activator TtdR;
GN Name=ttdR; OrderedLocusNames=c3810;
OS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=199310;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFT073 / ATCC 700928 / UPEC;
RX PubMed=12471157; DOI=10.1073/pnas.252529799;
RA Welch R.A., Burland V., Plunkett G. III, Redford P., Roesch P., Rasko D.,
RA Buckles E.L., Liou S.-R., Boutin A., Hackett J., Stroud D., Mayhew G.F.,
RA Rose D.J., Zhou S., Schwartz D.C., Perna N.T., Mobley H.L.T.,
RA Donnenberg M.S., Blattner F.R.;
RT "Extensive mosaic structure revealed by the complete genome sequence of
RT uropathogenic Escherichia coli.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:17020-17024(2002).
CC -!- FUNCTION: Positive regulator required for L-tartrate-dependent
CC anaerobic growth on glycerol. Induces expression of the ttdA-ttdB-ygjE
CC operon (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAN82255.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AE014075; AAN82255.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_000935202.1; NC_004431.1.
DR AlphaFoldDB; Q8FDH0; -.
DR SMR; Q8FDH0; -.
DR STRING; 199310.c3810; -.
DR EnsemblBacteria; AAN82255; AAN82255; c3810.
DR KEGG; ecc:c3810; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_4_6; -.
DR OMA; GEIAVNW; -.
DR Proteomes; UP000001410; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Activator; DNA-binding; Transcription; Transcription regulation.
FT CHAIN 1..310
FT /note="HTH-type transcriptional activator TtdR"
FT /id="PRO_0000262709"
FT DOMAIN 6..63
FT /note="HTH lysR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00253"
FT DNA_BIND 23..42
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00253"
SQ SEQUENCE 310 AA; 35285 MW; 2FF86FA019A870A9 CRC64;
MLNSWPLAKD LQVLVEIVHS GSFSAAAATL GQTPAFVTKR IQILENTLAT TLLNRSARGV
ALTESGQRCY EHALEILTQY QRLVDDVTQI KTRPEGMIRI GCSFGFGRSH IAPAITELMR
NYPELQVHFE LFDRQIDLVQ DNIDLDIRIN DAIPDYYIAH LLTKNKRILC AAPEYLQKYP
QPQSLQELSR HDCLVTKERD MTHGIWELGN GQEKKSVKVS GHLSSNSGEI VLQWALEGKG
IMLRSEWDVL PFLESGKLVR VLPEYAQSAN IWAVYREPLY RSMKLRVCVE FLAAWCQQRL
GKPDEGYQVM