C5621_YERPE
ID C5621_YERPE Reviewed; 127 AA.
AC Q9X6B1; Q0WBX2;
DT 02-MAY-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=Probable soluble cytochrome b562 1;
DE Short=Cytochrome b-562 1;
DE Flags: Precursor;
GN Name=cybC1; Synonyms=cybC; OrderedLocusNames=YPO3320, y0869, YP_0366;
OS Yersinia pestis.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=632;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=KIM;
RX PubMed=10322012; DOI=10.1128/jb.181.10.3114-3122.1999;
RA Garcia E., Nedialkov Y.A., Elliott J., Motin V.L., Brubaker R.R.;
RT "Molecular characterization of KatY (antigen 5), a thermoregulated
RT chromosomally encoded catalase-peroxidase of Yersinia pestis.";
RL J. Bacteriol. 181:3114-3122(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CO-92 / Biovar Orientalis;
RX PubMed=11586360; DOI=10.1038/35097083;
RA Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G.,
RA Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L.,
RA Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M.,
RA Chillingworth T., Cronin A., Davies R.M., Davis P., Dougan G., Feltwell T.,
RA Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S.,
RA Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J.,
RA Stevens K., Whitehead S., Barrell B.G.;
RT "Genome sequence of Yersinia pestis, the causative agent of plague.";
RL Nature 413:523-527(2001).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KIM10+ / Biovar Mediaevalis;
RX PubMed=12142430; DOI=10.1128/jb.184.16.4601-4611.2002;
RA Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P.,
RA Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D.,
RA Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A.,
RA Nilles M.L., Matson J.S., Blattner F.R., Perry R.D.;
RT "Genome sequence of Yersinia pestis KIM.";
RL J. Bacteriol. 184:4601-4611(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=91001 / Biovar Mediaevalis;
RX PubMed=15368893; DOI=10.1093/dnares/11.3.179;
RA Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D.,
RA Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L.,
RA Dai R., Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H.,
RA Wang J., Huang P., Yang R.;
RT "Complete genome sequence of Yersinia pestis strain 91001, an isolate
RT avirulent to humans.";
RL DNA Res. 11:179-197(2004).
CC -!- FUNCTION: Electron-transport protein of unknown function.
CC {ECO:0000250}.
CC -!- COFACTOR:
CC Name=heme b; Xref=ChEBI:CHEBI:60344; Evidence={ECO:0000250};
CC Note=Binds 1 heme b (iron(II)-protoporphyrin IX) group per molecule.
CC {ECO:0000250};
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the cytochrome b562 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAM84454.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AF135170; AAD37314.1; -; Genomic_DNA.
DR EMBL; AL590842; CAL21911.1; -; Genomic_DNA.
DR EMBL; AE009952; AAM84454.1; ALT_INIT; Genomic_DNA.
DR EMBL; AE017042; AAS60639.1; -; Genomic_DNA.
DR PIR; AD0403; AD0403.
DR RefSeq; WP_002215101.1; NZ_WUCM01000060.1.
DR RefSeq; YP_002348216.1; NC_003143.1.
DR AlphaFoldDB; Q9X6B1; -.
DR SMR; Q9X6B1; -.
DR STRING; 214092.YPO3320; -.
DR PaxDb; Q9X6B1; -.
DR DNASU; 1145816; -.
DR EnsemblBacteria; AAM84454; AAM84454; y0869.
DR EnsemblBacteria; AAS60639; AAS60639; YP_0366.
DR GeneID; 57975389; -.
DR KEGG; ype:YPO3320; -.
DR KEGG; ypk:y0869; -.
DR KEGG; ypm:YP_0366; -.
DR PATRIC; fig|1028802.3.peg.266; -.
DR eggNOG; COG3783; Bacteria.
DR HOGENOM; CLU_140814_1_1_6; -.
DR Proteomes; UP000000815; Chromosome.
DR Proteomes; UP000001019; Chromosome.
DR Proteomes; UP000002490; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR InterPro; IPR009155; Cyt_b562.
DR InterPro; IPR010980; Cyt_c/b562.
DR Pfam; PF07361; Cytochrom_B562; 1.
DR PIRSF; PIRSF000029; Cytochrome_b562; 1.
DR SUPFAM; SSF47175; SSF47175; 1.
PE 3: Inferred from homology;
KW Electron transport; Heme; Iron; Metal-binding; Periplasm;
KW Reference proteome; Signal; Transport.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..127
FT /note="Probable soluble cytochrome b562 1"
FT /id="PRO_0000003643"
FT BINDING 28
FT /ligand="heme b"
FT /ligand_id="ChEBI:CHEBI:60344"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000250"
FT BINDING 123
FT /ligand="heme b"
FT /ligand_id="ChEBI:CHEBI:60344"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000250"
SQ SEQUENCE 127 AA; 14192 MW; 5C3601C3B16E46B3 CRC64;
MRKIPIIAGV FSLLITSCTF AASLQDDMNI LIANLGIVSS STDTKVITSS LEKMRNAALD
AQKAIPPKLE GKAEDSPEIK DYRHGFDLLI EQIDKTKQWA EEGNIQEVKK SVGEVINIRN
TYHSRYR
