TXD16_MOUSE
ID TXD16_MOUSE Reviewed; 820 AA.
AC Q7TN22; Q69ZL5; Q8BL40; Q8R2W8; Q9CS82;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=Thioredoxin domain-containing protein 16;
DE Flags: Precursor;
GN Name=Txndc16 {ECO:0000312|MGI:MGI:1917811}; Synonyms=Kiaa1344;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC TISSUE=Fetal brain;
RX PubMed=15368895; DOI=10.1093/dnares/11.3.205;
RA Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S.,
RA Saga Y., Seino S., Nishimura M., Kaisho T., Hoshino K., Kitamura H.,
RA Nagase T., Ohara O., Koga H.;
RT "Prediction of the coding sequences of mouse homologues of KIAA gene: IV.
RT The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs
RT identified by screening of terminal sequences of cDNA clones randomly
RT sampled from size-fractionated libraries.";
RL DNA Res. 11:205-218(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), AND NUCLEOTIDE SEQUENCE
RP [LARGE SCALE MRNA] OF 1-354.
RC STRAIN=C57BL/6J; TISSUE=Corpora quadrigemina;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC STRAIN=FVB/N, and FVB/N-3; TISSUE=Mammary gland;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250|UniProtKB:Q9P2K2}.
CC Endoplasmic reticulum lumen {ECO:0000250|UniProtKB:Q9P2K2}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q7TN22-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q7TN22-2; Sequence=VSP_021364;
CC -!- DOMAIN: Contains a masked and non-functional KDEL endoplasmic reticulum
CC retrieval motif. {ECO:0000250|UniProtKB:Q9P2K2}.
CC -!- PTM: Glycosylated. {ECO:0000250|UniProtKB:Q9P2K2}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD32431.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AK173153; BAD32431.1; ALT_INIT; mRNA.
DR EMBL; AK017582; BAB30819.1; -; mRNA.
DR EMBL; AK046466; BAC32743.1; -; mRNA.
DR EMBL; BC027108; AAH27108.1; -; mRNA.
DR EMBL; BC052488; AAH52488.1; -; mRNA.
DR CCDS; CCDS26973.1; -. [Q7TN22-2]
DR CCDS; CCDS79300.1; -. [Q7TN22-1]
DR RefSeq; NP_001297463.1; NM_001310534.1. [Q7TN22-1]
DR RefSeq; NP_766185.1; NM_172597.3. [Q7TN22-2]
DR RefSeq; XP_006519583.1; XM_006519520.3. [Q7TN22-1]
DR RefSeq; XP_011243482.1; XM_011245180.2. [Q7TN22-1]
DR RefSeq; XP_017171675.1; XM_017316186.1. [Q7TN22-1]
DR AlphaFoldDB; Q7TN22; -.
DR SMR; Q7TN22; -.
DR STRING; 10090.ENSMUSP00000022377; -.
DR GlyGen; Q7TN22; 1 site.
DR iPTMnet; Q7TN22; -.
DR PhosphoSitePlus; Q7TN22; -.
DR EPD; Q7TN22; -.
DR MaxQB; Q7TN22; -.
DR PaxDb; Q7TN22; -.
DR PeptideAtlas; Q7TN22; -.
DR PRIDE; Q7TN22; -.
DR ProteomicsDB; 298393; -. [Q7TN22-1]
DR ProteomicsDB; 298394; -. [Q7TN22-2]
DR Antibodypedia; 149; 36 antibodies from 16 providers.
DR DNASU; 70561; -.
DR Ensembl; ENSMUST00000022377; ENSMUSP00000022377; ENSMUSG00000021830. [Q7TN22-2]
DR Ensembl; ENSMUST00000123879; ENSMUSP00000123023; ENSMUSG00000021830. [Q7TN22-1]
DR Ensembl; ENSMUST00000139526; ENSMUSP00000120287; ENSMUSG00000021830. [Q7TN22-1]
DR GeneID; 70561; -.
DR KEGG; mmu:70561; -.
DR UCSC; uc007tge.1; mouse. [Q7TN22-2]
DR UCSC; uc007tgf.1; mouse. [Q7TN22-1]
DR CTD; 57544; -.
DR MGI; MGI:1917811; Txndc16.
DR VEuPathDB; HostDB:ENSMUSG00000021830; -.
DR eggNOG; KOG0191; Eukaryota.
DR GeneTree; ENSGT00390000006080; -.
DR HOGENOM; CLU_018100_1_0_1; -.
DR InParanoid; Q7TN22; -.
DR OMA; HANVVFK; -.
DR OrthoDB; 1124691at2759; -.
DR PhylomeDB; Q7TN22; -.
DR TreeFam; TF328825; -.
DR BioGRID-ORCS; 70561; 1 hit in 72 CRISPR screens.
DR ChiTaRS; Txndc16; mouse.
DR PRO; PR:Q7TN22; -.
DR Proteomes; UP000000589; Chromosome 14.
DR RNAct; Q7TN22; protein.
DR Bgee; ENSMUSG00000021830; Expressed in animal zygote and 243 other tissues.
DR ExpressionAtlas; Q7TN22; baseline and differential.
DR Genevisible; Q7TN22; MM.
DR GO; GO:0005788; C:endoplasmic reticulum lumen; ISO:MGI.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR013766; Thioredoxin_domain.
DR InterPro; IPR040090; TXNDC16.
DR PANTHER; PTHR22699; PTHR22699; 1.
DR Pfam; PF00085; Thioredoxin; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Disulfide bond; Endoplasmic reticulum; Glycoprotein;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..820
FT /note="Thioredoxin domain-containing protein 16"
FT /id="PRO_0000257790"
FT DOMAIN 394..496
FT /note="Thioredoxin"
FT MOTIF 817..820
FT /note="Mediates endoplasmic reticulum retention"
FT /evidence="ECO:0000250|UniProtKB:Q9P2K2"
FT CARBOHYD 461
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 450..457
FT /evidence="ECO:0000250|UniProtKB:Q9P2K2"
FT VAR_SEQ 733..734
FT /note="TV -> I (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:16141072"
FT /id="VSP_021364"
SQ SEQUENCE 820 AA; 92105 MW; 6006949E004D2BC0 CRC64;
MMSSGFSVFR AGVALVLMCS FYKSTEDSLP ELTPQQYFST LQPGKASLVY FCQVGSLSNS
VFLEELKEAV KPLQDYGISV AKVTCVEEEA SRYCGEEEGL MKAYLFRGNI LLREFPTDIL
FDVNAIIAHV LFALLFNEVK YITTLEDLHS IENSLKGKSN MIFSYVEAIG TPEHRAVMEA
AFVYGTSYQF ALTTEIALLE NIGSESIEHA HLYFFHCKLV LDLTEHCRRT LMEQPLTTLN
IHVFVKTMNA PLLMEVAEDP QQVSTVHLQL GLPLVFIISQ RATQEADRRT AEWVAWHLLG
KAGVLLLLRD SMDVNIPQHA NVAFRRAEKD VPVEFLVLND VELIISHVKN NMHIEEIQED
EGEDMEGPDL AVEDDEVAGT VYRDRKKPLP LELSVELTEE TFNTTVMTSD SIVLFYATWH
AVSMAFLQSY IDVAIKLKGR STILLTRINC ADWSDICTKQ NVTAFPVVKL YKEGESPVSY
AGMLATKDLL KFIQLNKISC PVNIASIQEA EKYLRGELYK DLPSSASVSV LGLFSPAMAS
AKELFREAGK QLRGSVITGI YSEDDVWILS NKYATTLPAL LLARPKEGRI ESVPLDTTLV
QDMAQILANA LLEAFPEITV ENLPTYLRFQ RPLLLLFSGG SINPQYRNTI LALVRQKQLD
SFTPCWLNLK NTPVGRGILK AYFGRLPPLP QLLLVNLHSG GQVYAFPSSQ SVTEQSLVLW
LKHLQAGLEN PITVLSAQEW KPPLPAFDFL NMMDAPTSQA PTKKVLECQK EAEVQESAEL
QPGDRSTARR EPVEMLRIKR WNTANWPKDT QEPFHHDKEL