ID   TYPH_NITHX              Reviewed;         510 AA.
AC   Q1QM39;
DT   15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT   15-JAN-2008, sequence version 2.
DT   03-AUG-2022, entry version 81.
DE   RecName: Full=Putative thymidine phosphorylase {ECO:0000255|HAMAP-Rule:MF_00703};
DE            EC=2.4.2.4 {ECO:0000255|HAMAP-Rule:MF_00703};
DE   AltName: Full=TdRPase {ECO:0000255|HAMAP-Rule:MF_00703};
GN   OrderedLocusNames=Nham_1900;
OS   Nitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Bradyrhizobiaceae; Nitrobacter.
OX   NCBI_TaxID=323097;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 10229 / NCIMB 13809 / X14;
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L.,
RA   O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T.,
RA   Gentry M.E., Bruce D., Richardson P.;
RT   "Complete sequence of chromosome of Nitrobacter hamburgensis X14.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=phosphate + thymidine = 2-deoxy-alpha-D-ribose 1-phosphate +
CC         thymine; Xref=Rhea:RHEA:16037, ChEBI:CHEBI:17748, ChEBI:CHEBI:17821,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:57259; EC=2.4.2.4;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_00703};
CC   -!- SIMILARITY: Belongs to the thymidine/pyrimidine-nucleoside
CC       phosphorylase family. Type 2 subfamily. {ECO:0000255|HAMAP-
CC       Rule:MF_00703}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=ABE62708.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; CP000319; ABE62708.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; WP_041357912.1; NC_007964.1.
DR   AlphaFoldDB; Q1QM39; -.
DR   SMR; Q1QM39; -.
DR   STRING; 323097.Nham_1900; -.
DR   EnsemblBacteria; ABE62708; ABE62708; Nham_1900.
DR   KEGG; nha:Nham_1900; -.
DR   eggNOG; COG0213; Bacteria.
DR   HOGENOM; CLU_025040_6_0_5; -.
DR   OrthoDB; 1724909at2; -.
DR   Proteomes; UP000001953; Chromosome.
DR   GO; GO:0004645; F:1,4-alpha-oligoglucan phosphorylase activity; IEA:InterPro.
DR   GO; GO:0009032; F:thymidine phosphorylase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006206; P:pyrimidine nucleobase metabolic process; IEA:InterPro.
DR   GO; GO:0006213; P:pyrimidine nucleoside metabolic process; IEA:InterPro.
DR   Gene3D; 3.40.1030.10; -; 1.
DR   Gene3D; 3.90.1170.30; -; 1.
DR   HAMAP; MF_00703; Thymid_phosp_2; 1.
DR   InterPro; IPR000312; Glycosyl_Trfase_fam3.
DR   InterPro; IPR017459; Glycosyl_Trfase_fam3_N_dom.
DR   InterPro; IPR036320; Glycosyl_Trfase_fam3_N_dom_sf.
DR   InterPro; IPR035902; Nuc_phospho_transferase.
DR   InterPro; IPR036566; PYNP-like_C_sf.
DR   InterPro; IPR013102; PYNP_C.
DR   InterPro; IPR017872; Pyrmidine_PPase_CS.
DR   InterPro; IPR028579; Thym_Pase_Put.
DR   InterPro; IPR013466; Thymidine/AMP_Pase.
DR   InterPro; IPR000053; Thymidine/pyrmidine_PPase.
DR   PANTHER; PTHR10515; PTHR10515; 1.
DR   Pfam; PF02885; Glycos_trans_3N; 1.
DR   Pfam; PF00591; Glycos_transf_3; 1.
DR   Pfam; PF07831; PYNP_C; 1.
DR   SMART; SM00941; PYNP_C; 1.
DR   SUPFAM; SSF47648; SSF47648; 1.
DR   SUPFAM; SSF52418; SSF52418; 1.
DR   SUPFAM; SSF54680; SSF54680; 1.
DR   TIGRFAMs; TIGR02645; ARCH_P_rylase; 1.
DR   PROSITE; PS00647; THYMID_PHOSPHORYLASE; 1.
PE   3: Inferred from homology;
KW   Glycosyltransferase; Reference proteome; Transferase.
FT   CHAIN           1..510
FT                   /note="Putative thymidine phosphorylase"
FT                   /id="PRO_0000314704"
SQ   SEQUENCE   510 AA;  54756 MW;  787647AD246C0489 CRC64;
     MNGTDLPRLQ PKIRRVNLDT GRENVVVISR HSAALRPEIF RGFSRVELRR NAKIMLATLI
     ITDDDSLVGP DDLGLSEPAF RRFAEPVGSA VTIAPAASPA SLDAVRAKIM GQTFSAVDIS
     AIIDDLTHYR YSDMEIAAFL ISSASFMTNG ELIALVDSMA RAGTQLKWRN PIIVDKHCIG
     GIPGNRTSMI VVPIVAAHGL TIPKTSSRAI TSPAGTADTM EMLARVDVGV EEMKDIVAAC
     RGCLVWGGHV NLSPADDILI SVERPLGLDT REQMVASILS KKLAAGSTHL LIDLPVGPTA
     KLVNEMEAMR LRKLFEFVGD HYGISVEVVV TDGRQPIGNG IGPVLEAQDV MAVLANDPEA
     PADLREKSLR LAAHLLEYDP KLRGGSGYAR ARELLDSGAA LKQMQKIIDA QGPPTCCTDL
     GNLTFDVTAS RDGFVSGINC LQLNRLARIA GAPIDKGAGI RLFKKIGDRV QQGEPLYRIH
     AFERSGRDLA AAGTTAYTID SEESNLEATP