U16_HHV6U
ID U16_HHV6U Reviewed; 334 AA.
AC Q69551; Q76VQ2; Q89432;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 22-JUL-2008, sequence version 2.
DT 02-JUN-2021, entry version 58.
DE RecName: Full=Protein U17/U16;
GN Name=U17/U16;
OS Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B
OS lymphotropic virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus.
OX NCBI_TaxID=10370;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND ALTERNATIVE SPLICING (ISOFORMS 2 AND
RP 3).
RX PubMed=8289364; DOI=10.1128/jvi.68.2.597-610.1994;
RA Nicholas J., Martin M.E.D.;
RT "Nucleotide sequence analysis of a 38.5-kilobase-pair region of the genome
RT of human herpesvirus 6 encoding human cytomegalovirus immediate-early gene
RT homologs and transactivating functions.";
RL J. Virol. 68:597-610(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=7747482; DOI=10.1006/viro.1995.1228;
RA Gompels U.A., Nicholas J., Lawrence G.L., Jones M., Thomson B.J.,
RA Martin M.E.D., Efstathiou S., Craxton M.A., Macaulay H.A.;
RT "The DNA sequence of human herpesvirus-6: structure, coding content, and
RT genome evolution.";
RL Virology 209:29-51(1995).
CC -!- FUNCTION: Isoform 3 can transactivate the human immunodeficiency virus
CC type 1 promoter. {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=3;
CC Name=1; Synonyms=Protein U17/U16, Protein U16exon1-2;
CC IsoId=Q69551-1; Sequence=Displayed;
CC Name=2; Synonyms=Protein U17, EFLF1;
CC IsoId=Q69552-1; Sequence=External;
CC Name=3; Synonyms=Protein U16, EFLF2;
CC IsoId=Q69551-2; Sequence=VSP_034621;
CC -!- SIMILARITY: Belongs to the herpesviridae US22 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA16721.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAA58395.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAA58396.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; M81789; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; L25528; AAA16721.1; ALT_SEQ; Genomic_DNA.
DR EMBL; X83413; CAA58395.1; ALT_SEQ; Genomic_DNA.
DR EMBL; X83413; CAA58396.1; ALT_SEQ; Genomic_DNA.
DR PIR; T09308; T09308.
DR PRIDE; Q69551; -.
DR Proteomes; UP000009295; Genome.
DR InterPro; IPR003360; US22-like.
DR Pfam; PF02393; US22; 1.
PE 3: Inferred from homology;
KW Activator; Alternative splicing; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..334
FT /note="Protein U17/U16"
FT /id="PRO_0000343647"
FT VAR_SEQ 1..191
FT /note="Missing (in isoform 3)"
FT /evidence="ECO:0000305"
FT /id="VSP_034621"
FT CONFLICT 226
FT /note="Y -> C (in Ref. 1; M81789)"
FT /evidence="ECO:0000305"
FT CONFLICT 232
FT /note="D -> H (in Ref. 1; M81789)"
FT /evidence="ECO:0000305"
FT CONFLICT 302
FT /note="N -> S (in Ref. 1; M81789)"
FT /evidence="ECO:0000305"
FT CONFLICT 325
FT /note="I -> N (in Ref. 1; M81789)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 334 AA; 38493 MW; 9627082A31D3CECA CRC64;
MADERTSDSV KTRYDIALMK LNDIKIAVFR DSLSTYVEQK TGLTIQFNWP KSRCLVISTL
CKIPFPTKSA AELQEMCSLL LCCPERLQLL GYVSVWGEET RDVCLTKTLV FAGEDEKFYG
LDFVNETLYL LAETTERFAV LGLRRYDPVY REKDIRFLTK IDDVLQSLID AQDNLWKFAT
IVYKNSGRHY IMKSCLENND GVFVLFLTRK EDFPSRMEWN FFSDVYESMP YDGQVIGSIG
KTLLYPKTMF VMMDLSGAIY GIDTIGTGIG SCVKIADDFE SFLRQGIVRG YRRYKFFHRN
INTVQEILPL CPHTSLGPTF SNNYIYDLSS EDDE