U376C_CAEEL
ID U376C_CAEEL Reviewed; 201 AA.
AC Q22957;
DT 05-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2001, sequence version 2.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=UPF0376 protein F10G2.1;
GN ORFNames=F10G2.1;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-32, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RC STRAIN=Bristol N2;
RX PubMed=12754521; DOI=10.1038/nbt829;
RA Kaji H., Saito H., Yamauchi Y., Shinkawa T., Taoka M., Hirabayashi J.,
RA Kasai K., Takahashi N., Isobe T.;
RT "Lectin affinity capture, isotope-coded tagging and mass spectrometry to
RT identify N-linked glycoproteins.";
RL Nat. Biotechnol. 21:667-672(2003).
RN [3]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-32, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RC STRAIN=Bristol N2;
RX PubMed=17761667; DOI=10.1074/mcp.m600392-mcp200;
RA Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T.,
RA Taoka M., Takahashi N., Isobe T.;
RT "Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis
RT elegans and suggests an atypical translocation mechanism for integral
RT membrane proteins.";
RL Mol. Cell. Proteomics 6:2100-2109(2007).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type II
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UPF0376 family. {ECO:0000305}.
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DR EMBL; FO080316; CCD62809.1; -; Genomic_DNA.
DR RefSeq; NP_504867.1; NM_072466.3.
DR AlphaFoldDB; Q22957; -.
DR STRING; 6239.F10G2.1; -.
DR iPTMnet; Q22957; -.
DR EPD; Q22957; -.
DR PaxDb; Q22957; -.
DR PeptideAtlas; Q22957; -.
DR EnsemblMetazoa; F10G2.1.1; F10G2.1.1; WBGene00017362.
DR EnsemblMetazoa; F10G2.1.2; F10G2.1.2; WBGene00017362.
DR GeneID; 179122; -.
DR KEGG; cel:CELE_F10G2.1; -.
DR UCSC; F10G2.1; c. elegans.
DR CTD; 179122; -.
DR WormBase; F10G2.1; CE27945; WBGene00017362; -.
DR eggNOG; ENOG502THJ5; Eukaryota.
DR GeneTree; ENSGT00970000195826; -.
DR HOGENOM; CLU_078890_1_0_1; -.
DR InParanoid; Q22957; -.
DR OMA; WDPFPDA; -.
DR OrthoDB; 1767442at2759; -.
DR PhylomeDB; Q22957; -.
DR PRO; PR:Q22957; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00017362; Expressed in adult organism and 3 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR002542; DUF19.
DR InterPro; IPR016638; UPF0376.
DR Pfam; PF01579; DUF19; 1.
DR PIRSF; PIRSF015697; UCP015697; 1.
PE 1: Evidence at protein level;
KW Glycoprotein; Membrane; Reference proteome; Signal-anchor; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..201
FT /note="UPF0376 protein F10G2.1"
FT /id="PRO_0000248557"
FT TOPO_DOM 1..3
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 4..24
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 25..201
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT CARBOHYD 32
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000269|PubMed:12754521,
FT ECO:0000269|PubMed:17761667"
FT CARBOHYD 124
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 201 AA; 22989 MW; 596AFD3C712007DA CRC64;
MKHFLLLAII GILFLGSTYG ASVATEKLKA SNCTKTEGFQ AIACVLRMAD FAQKIEKLDM
DDKNQVNEFE KSCVSFANCF ETLQCGPEDP AEKKINNMIK NYCDAVVYVA KDFADCSEKL
ENKNSTCYQN WDPFPDAIDE ETDEKKKEKM LQEACKNYFG KDNCLKKEIT EKCSETEWKG
FRDHFIGISN ILLECDFRNI Q