U496B_ARATH
ID U496B_ARATH Reviewed; 354 AA.
AC Q9SYZ8;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=UPF0496 protein At4g34330;
GN OrderedLocusNames=At4g34330; ORFNames=F10M10.100;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UPF0496 family. {ECO:0000305}.
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DR EMBL; AL035521; CAB36710.1; -; Genomic_DNA.
DR EMBL; AL161585; CAB80150.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE86360.1; -; Genomic_DNA.
DR PIR; T04779; T04779.
DR RefSeq; NP_195159.1; NM_119598.2.
DR AlphaFoldDB; Q9SYZ8; -.
DR SMR; Q9SYZ8; -.
DR PaxDb; Q9SYZ8; -.
DR PRIDE; Q9SYZ8; -.
DR DNASU; 829583; -.
DR EnsemblPlants; AT4G34330.1; AT4G34330.1; AT4G34330.
DR GeneID; 829583; -.
DR Gramene; AT4G34330.1; AT4G34330.1; AT4G34330.
DR KEGG; ath:AT4G34330; -.
DR Araport; AT4G34330; -.
DR TAIR; locus:2116139; AT4G34330.
DR eggNOG; ENOG502QQBT; Eukaryota.
DR HOGENOM; CLU_044778_0_0_1; -.
DR InParanoid; Q9SYZ8; -.
DR OMA; ACKQDKE; -.
DR OrthoDB; 1134085at2759; -.
DR PhylomeDB; Q9SYZ8; -.
DR PRO; PR:Q9SYZ8; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9SYZ8; baseline and differential.
DR Genevisible; Q9SYZ8; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR007749; DUF677.
DR PANTHER; PTHR31113; PTHR31113; 1.
DR Pfam; PF05055; DUF677; 1.
PE 3: Inferred from homology;
KW Coiled coil; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..354
FT /note="UPF0496 protein At4g34330"
FT /id="PRO_0000306887"
FT TRANSMEM 200..220
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 222..242
FT /note="Helical"
FT /evidence="ECO:0000255"
FT COILED 270..341
FT /evidence="ECO:0000255"
SQ SEQUENCE 354 AA; 40457 MW; E8A54ADE92A33554 CRC64;
MGNKTSRKSK EKSGRNYTTE LRSYEAACKE DMEIQSFDTR MQARTSHVIS TLATGVEVRS
LSFDSLKAVI GSLLDMNQEV AKVILDCKKD IWKNQEMFEF VEAYFETSLK TLDFFNALKR
GLQGVQINHL FILDGNGYKK TLQELKRFKD ADRPFDQDFF KMFQSVYNQQ KWMLDKLQRR
QNKLDKKLKR IRTWRKLSSI IFMATFATLV ICSVLAATMA APHVAAALAA ATPPVGSMGK
WIDSLWKNYE NEIKGQTEVF SSMYVGTYVA VQDLNNIKDL IKRLDTEIRG MVKNAEYAGE
LGPVKIGINA IKTQLEVFKK NVEELEIQAD MCSTDIRRAR TVILQRIINA TCST
