U496C_ARATH
ID U496C_ARATH Reviewed; 374 AA.
AC Q9LHD9; Q8H7D0; Q8H7E9; Q944H3;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=UPF0496 protein At3g28270;
GN OrderedLocusNames=At3g28270; ORFNames=MZF16.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-327 AND 27-374.
RA Stracke R., Palme K.;
RT "Signal peptide selection derived cDNAs from Arabidopsis thaliana leaves
RT and guard cells.";
RL Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UPF0496 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAN60297.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AP002051; BAB02617.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE77425.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE77426.1; -; Genomic_DNA.
DR EMBL; AF428437; AAL16206.1; -; mRNA.
DR EMBL; AY062740; AAL32818.1; -; mRNA.
DR EMBL; AY128788; AAM91188.1; -; mRNA.
DR EMBL; AF083707; AAN60266.1; -; mRNA.
DR EMBL; AF083739; AAN60297.1; ALT_INIT; mRNA.
DR RefSeq; NP_566836.1; NM_113746.3.
DR RefSeq; NP_850644.1; NM_180313.2.
DR AlphaFoldDB; Q9LHD9; -.
DR SMR; Q9LHD9; -.
DR BioGRID; 7782; 5.
DR STRING; 3702.AT3G28270.1; -.
DR PaxDb; Q9LHD9; -.
DR PRIDE; Q9LHD9; -.
DR ProteomicsDB; 228517; -.
DR EnsemblPlants; AT3G28270.1; AT3G28270.1; AT3G28270.
DR EnsemblPlants; AT3G28270.2; AT3G28270.2; AT3G28270.
DR GeneID; 822453; -.
DR Gramene; AT3G28270.1; AT3G28270.1; AT3G28270.
DR Gramene; AT3G28270.2; AT3G28270.2; AT3G28270.
DR KEGG; ath:AT3G28270; -.
DR Araport; AT3G28270; -.
DR TAIR; locus:2095395; AT3G28270.
DR eggNOG; ENOG502QQBT; Eukaryota.
DR HOGENOM; CLU_044778_1_0_1; -.
DR OMA; KSACEEH; -.
DR OrthoDB; 1379181at2759; -.
DR PhylomeDB; Q9LHD9; -.
DR PRO; PR:Q9LHD9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LHD9; baseline and differential.
DR Genevisible; Q9LHD9; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0031234; C:extrinsic component of cytoplasmic side of plasma membrane; IDA:TAIR.
DR GO; GO:0031313; C:extrinsic component of endosome membrane; IDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0042631; P:cellular response to water deprivation; IMP:TAIR.
DR InterPro; IPR007749; DUF677.
DR PANTHER; PTHR31113; PTHR31113; 1.
DR Pfam; PF05055; DUF677; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..374
FT /note="UPF0496 protein At3g28270"
FT /id="PRO_0000306888"
FT TRANSMEM 214..234
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 235..255
FT /note="Helical"
FT /evidence="ECO:0000255"
FT COILED 171..210
FT /evidence="ECO:0000255"
FT COILED 256..321
FT /evidence="ECO:0000255"
FT CONFLICT 5
FT /note="K -> E (in Ref. 4; AAN60266)"
FT /evidence="ECO:0000305"
FT CONFLICT 9
FT /note="L -> S (in Ref. 4; AAN60266)"
FT /evidence="ECO:0000305"
FT CONFLICT 16
FT /note="Missing (in Ref. 4; AAN60266)"
FT /evidence="ECO:0000305"
FT CONFLICT 23
FT /note="C -> Y (in Ref. 3; AAL16206)"
FT /evidence="ECO:0000305"
FT CONFLICT 28
FT /note="K -> Q (in Ref. 4; AAN60266/AAN60297)"
FT /evidence="ECO:0000305"
FT CONFLICT 179
FT /note="R -> L (in Ref. 4; AAN60266/AAN60297)"
FT /evidence="ECO:0000305"
FT CONFLICT 195
FT /note="R -> K (in Ref. 4; AAN60266/AAN60297)"
FT /evidence="ECO:0000305"
FT CONFLICT 203
FT /note="S -> T (in Ref. 4; AAN60266/AAN60297)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 374 AA; 41613 MW; AE26E1F99CCD6CAD CRC64;
MALSKDLMLK CSEDMMSAYK SACEEHPKLK SFDASLQQRT NKMIDSLTVE DKNGSSSPHD
AHMELSKHLV EVTQGVADFI TEIEDDVWDN QALKYLVLAY FENTKKTLEI FKTIENCVEN
AEMGQLLIRE ALAEFEKESA EKDVGGKKKK YEKTLEDLKS FKEMGDPFDG KVLTTQFERI
KKQQESLLEE VSETRKKIQD EISNLEKKTL ITNVVFGAAF AIVAVASIAL IATGVGAAAG
FGALAAPLLA AGWAGVYTTL DKKKDALNKQ LEGLKKVEEI EESVEKGIKT NEEATETVSI
LVDGLEDRIK NMLKLVDNAI DHEDNEAATR IVLTQISKKV EKLTKKITEV GESVEDHSKL
IAKARLQVLQ KINR
