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U496D_ORYSJ
ID   U496D_ORYSJ             Reviewed;         456 AA.
AC   Q337C0; A3C6F6; B7ETR9; Q9FW77;
DT   02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT   06-DEC-2005, sequence version 1.
DT   03-AUG-2022, entry version 70.
DE   RecName: Full=UPF0496 protein 4;
GN   OrderedLocusNames=Os10g0513300, LOC_Os10g36950;
GN   ORFNames=OsJ_030878, OSJNBa0026L12.27;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12791992; DOI=10.1126/science.1083523;
RA   Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S.,
RA   Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D.,
RA   Oates R., Palmer M., Pries G., Gibson J., Anderson H., Paradkar M.,
RA   Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F.,
RA   Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M.,
RA   Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R.,
RA   Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F.,
RA   Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D.,
RA   Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R.,
RA   Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA   Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S.,
RA   Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S.,
RA   Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R.,
RA   Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M.,
RA   Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA   Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E.,
RA   Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT   "In-depth view of structure, activity, and evolution of rice chromosome
RT   10.";
RL   Science 300:1566-1569(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC       protein {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the UPF0496 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAG13509.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=BAF26963.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=EAZ16669.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AC068924; AAG13509.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; DP000086; ABB47882.1; -; Genomic_DNA.
DR   EMBL; AP008216; BAF26963.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014966; BAT11638.1; -; Genomic_DNA.
DR   EMBL; CM000147; EAZ16669.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AK102890; BAG95766.1; -; mRNA.
DR   RefSeq; XP_015614868.1; XM_015759382.1.
DR   AlphaFoldDB; Q337C0; -.
DR   SMR; Q337C0; -.
DR   STRING; 4530.OS10T0513300-01; -.
DR   PaxDb; Q337C0; -.
DR   PRIDE; Q337C0; -.
DR   EnsemblPlants; Os10t0513300-01; Os10t0513300-01; Os10g0513300.
DR   GeneID; 4349103; -.
DR   Gramene; Os10t0513300-01; Os10t0513300-01; Os10g0513300.
DR   KEGG; osa:4349103; -.
DR   eggNOG; ENOG502QPVM; Eukaryota.
DR   HOGENOM; CLU_034894_0_0_1; -.
DR   InParanoid; Q337C0; -.
DR   OMA; GWRQHIG; -.
DR   OrthoDB; 816771at2759; -.
DR   Proteomes; UP000000763; Chromosome 10.
DR   Proteomes; UP000007752; Chromosome 10.
DR   Proteomes; UP000059680; Chromosome 10.
DR   ExpressionAtlas; Q337C0; baseline and differential.
DR   Genevisible; Q337C0; OS.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR008511; ROH1-like.
DR   Pfam; PF05633; BPS1; 1.
PE   2: Evidence at transcript level;
KW   Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT   CHAIN           1..456
FT                   /note="UPF0496 protein 4"
FT                   /id="PRO_0000306911"
FT   TRANSMEM        195..217
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   REGION          368..390
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        369..389
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   456 AA;  49737 MW;  17A0647EC5E489CF CRC64;
     MSRAHGSPRS FFPVGNPFRV MFPGGAHLSR KLQELLASYE DALALSLRKL KPEAASDVLT
     LSWMRLAVDC LSELHTNIAN LITDLELPVS DWDDKWVDIY LNSSVKLLDI CIALSSELSR
     LDQGQLLLQY ALHVLGSESG VPSQEQLKRA EPSLREWMEL VGVRCARLVS CSATLQELAG
     NLSLMKVKNS AKGKVLMRAL YGIESVTVFV CSIFVAVLSG SPKPLVELHV PEKFGWSQAF
     NDLHTAVSEE LTRQLSGGSV AAVKELEEVE ACARRLHVLA STSQLEEEAA NLANAVSHTE
     EEVMSDSIAQ EGDHHCGLKL ADDTTREGGI VISESIAEGG TQEAEMKKDI SYEKEVAMVE
     RISYKEHQDS NVKQANGSSD ESALVVPERT SVQESKEELL NCISSMSKSA EGLRHGLDSL
     SKRVGDFFQI VLTGRDALLC NLRISDAASK VAEVSS
 
 
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