U496G_ARATH
ID U496G_ARATH Reviewed; 408 AA.
AC Q9LVR3;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=UPF0496 protein At5g66670;
GN OrderedLocusNames=At5g66670; ORFNames=MSN2.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Xiao Y.-L., Underwood B.A., Moskal W.A. Jr., Redman J.C., Wang W.,
RA Monaghan E.L., Wu H.C., Utterback T., Town C.D.;
RT "Reconstruction of cDNA sequences for hypothetical genes in Arabidopsis
RT thaliana from 5' and 3' RACE products.";
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UPF0496 family. {ECO:0000305}.
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DR EMBL; AB018119; BAA97273.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98248.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98249.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70076.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70077.1; -; Genomic_DNA.
DR EMBL; DQ459202; ABE97199.1; -; Genomic_DNA.
DR EMBL; DQ132763; AAZ52793.1; -; mRNA.
DR EMBL; DQ132764; AAZ52794.1; -; mRNA.
DR RefSeq; NP_001078809.1; NM_001085340.1.
DR RefSeq; NP_001318891.1; NM_001345796.1.
DR RefSeq; NP_001331712.1; NM_001345797.1.
DR RefSeq; NP_201468.1; NM_126065.4.
DR AlphaFoldDB; Q9LVR3; -.
DR SMR; Q9LVR3; -.
DR PaxDb; Q9LVR3; -.
DR PRIDE; Q9LVR3; -.
DR ProteomicsDB; 242588; -.
DR EnsemblPlants; AT5G66670.1; AT5G66670.1; AT5G66670.
DR EnsemblPlants; AT5G66670.2; AT5G66670.2; AT5G66670.
DR EnsemblPlants; AT5G66670.3; AT5G66670.3; AT5G66670.
DR EnsemblPlants; AT5G66670.4; AT5G66670.4; AT5G66670.
DR GeneID; 836799; -.
DR Gramene; AT5G66670.1; AT5G66670.1; AT5G66670.
DR Gramene; AT5G66670.2; AT5G66670.2; AT5G66670.
DR Gramene; AT5G66670.3; AT5G66670.3; AT5G66670.
DR Gramene; AT5G66670.4; AT5G66670.4; AT5G66670.
DR KEGG; ath:AT5G66670; -.
DR Araport; AT5G66670; -.
DR TAIR; locus:2173649; AT5G66670.
DR eggNOG; ENOG502QVAQ; Eukaryota.
DR HOGENOM; CLU_044778_0_0_1; -.
DR InParanoid; Q9LVR3; -.
DR OMA; YESVYEQ; -.
DR OrthoDB; 1030078at2759; -.
DR PhylomeDB; Q9LVR3; -.
DR PRO; PR:Q9LVR3; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LVR3; baseline and differential.
DR Genevisible; Q9LVR3; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR007749; DUF677.
DR PANTHER; PTHR31113; PTHR31113; 1.
DR Pfam; PF05055; DUF677; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..408
FT /note="UPF0496 protein At5g66670"
FT /id="PRO_0000306892"
FT TRANSMEM 239..259
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 262..282
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 408 AA; 45597 MW; 28E97FDFC40A12A6 CRC64;
MVFCGLFSEL IKGHSSSNNN GTNVSLAKTI QTNIRSQYSS DLSSYASACK KYSSLKSFDS
LLHERTNSII SSLAAQAKTR SLNIESLMEV YGYLLELNQD TVRVIIESKE DVLKNNDLKA
LVDVYFKSTS KTLDFCNTVE KCVKKAEISQ LIIRFAVKQF ETETVDTDLG ESKKKKYVKT
LEEMNKFKAM GDPFDGEFVT QYKSVYDEQV LLLDELRKLK VKLGKKLRNI KTWRILSNVV
FATAFVTVFV LSVVAAAMMA PPVLSAVASG LTTPIEVVGM WCNKMWKEYE KAVKRQRGLV
LTMELGVQAN NVTMVNIKFE VENLSIRISS ILKTVNFAVD REENEMATRF AMQEIKKKVE
GFTEKIEEVG ERAANCSKLI ALGRLVVLGH ILGLHIVEGG AANIISSV