U496I_ARATH
ID U496I_ARATH Reviewed; 393 AA.
AC Q56XQ0; Q9ZNR3;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 31-MAY-2011, sequence version 3.
DT 25-MAY-2022, entry version 80.
DE RecName: Full=UPF0496 protein At2g18630;
GN OrderedLocusNames=At2g18630; ORFNames=F24H14.1, MSF3.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UPF0496 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD08932.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=AAM15135.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC005724; AAD08932.1; ALT_INIT; Genomic_DNA.
DR EMBL; AC006135; AAM15135.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002685; AEC06787.1; -; Genomic_DNA.
DR EMBL; AK221623; BAD95236.1; -; mRNA.
DR PIR; F84566; F84566.
DR RefSeq; NP_179453.2; NM_127419.4.
DR AlphaFoldDB; Q56XQ0; -.
DR SMR; Q56XQ0; -.
DR iPTMnet; Q56XQ0; -.
DR PaxDb; Q56XQ0; -.
DR PRIDE; Q56XQ0; -.
DR ProteomicsDB; 243203; -.
DR EnsemblPlants; AT2G18630.1; AT2G18630.1; AT2G18630.
DR GeneID; 816378; -.
DR Gramene; AT2G18630.1; AT2G18630.1; AT2G18630.
DR KEGG; ath:AT2G18630; -.
DR Araport; AT2G18630; -.
DR TAIR; locus:2053962; AT2G18630.
DR eggNOG; ENOG502QVAQ; Eukaryota.
DR HOGENOM; CLU_044778_0_0_1; -.
DR InParanoid; Q56XQ0; -.
DR OrthoDB; 1134085at2759; -.
DR PRO; PR:Q56XQ0; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q56XQ0; baseline and differential.
DR Genevisible; Q56XQ0; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005777; C:peroxisome; IDA:TAIR.
DR InterPro; IPR007749; DUF677.
DR PANTHER; PTHR31113; PTHR31113; 1.
DR Pfam; PF05055; DUF677; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..393
FT /note="UPF0496 protein At2g18630"
FT /id="PRO_0000306894"
FT TRANSMEM 226..246
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 249..269
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 149..222
FT /evidence="ECO:0000255"
FT COILED 299..356
FT /evidence="ECO:0000255"
SQ SEQUENCE 393 AA; 45006 MW; 0529CEDCDC36C885 CRC64;
MMGGKSSKSK KNVEFGSPST PVQIKINSEY TEHLSSYERA CSEDPKLESF DSALHERTNR
VINKLASGVE IKSLSFDSLR EVTQCLLDMN QDVVKVILQD KEDIWNNQDL FSLVNLYFES
TAKTMDFCSE LENCLNRARR SQVIIQFAVN QFEEENEDKE NRKYEKTLEE LKRFKVAGEP
FTKEFFALFD LVYKQQVMML EELHKLKRKL DKRLRNIKTW RRVSNMVFVT AFVSVLIFSV
VAAAVAAPPV VAAIAGALAV PVGSVGKWCN TLWTKYEKVV RGQKEIITSI RIGTYISVKE
MDNISILVRK VEVEIESLLK KAEFAITEEK EVRLAIDEIK KKLDVFTETI EELGEHAGKY
CSDVTKARTV ILQRIIRYPA GSPKDEAPWT EMM