U548_ARATH
ID U548_ARATH Reviewed; 205 AA.
AC Q8GXB1;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 89.
DE RecName: Full=UPF0548 protein At2g17695;
GN OrderedLocusNames=At2g17695; ORFNames=T17A5.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SIMILARITY: Belongs to the UPF0548 family. {ECO:0000305}.
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DR EMBL; CP002685; AEC06667.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC06668.1; -; Genomic_DNA.
DR EMBL; AK118331; BAC42945.1; -; mRNA.
DR EMBL; BT005572; AAO63992.1; -; mRNA.
DR RefSeq; NP_001118341.1; NM_001124869.2.
DR RefSeq; NP_849965.1; NM_179634.4.
DR AlphaFoldDB; Q8GXB1; -.
DR STRING; 3702.AT2G17695.1; -.
DR PaxDb; Q8GXB1; -.
DR PRIDE; Q8GXB1; -.
DR ProteomicsDB; 242608; -.
DR EnsemblPlants; AT2G17695.1; AT2G17695.1; AT2G17695.
DR EnsemblPlants; AT2G17695.2; AT2G17695.2; AT2G17695.
DR GeneID; 816277; -.
DR Gramene; AT2G17695.1; AT2G17695.1; AT2G17695.
DR Gramene; AT2G17695.2; AT2G17695.2; AT2G17695.
DR KEGG; ath:AT2G17695; -.
DR Araport; AT2G17695; -.
DR TAIR; locus:1005716645; AT2G17695.
DR eggNOG; ENOG502QTWG; Eukaryota.
DR HOGENOM; CLU_080841_0_1_1; -.
DR InParanoid; Q8GXB1; -.
DR OMA; LQNWRHF; -.
DR PhylomeDB; Q8GXB1; -.
DR PRO; PR:Q8GXB1; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8GXB1; baseline and differential.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR InterPro; IPR018960; DUF1990.
DR Pfam; PF09348; DUF1990; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..205
FT /note="UPF0548 protein At2g17695"
FT /id="PRO_0000326875"
SQ SEQUENCE 205 AA; 23245 MW; 4D1C40935666450A CRC64;
MVFLSWGRPS SEQQQQVINK TGTFNYDNKY RGVSSRSIAK LKEDSEIDKD GFLINHARVL
VGSGRESYEK GKKALQNWKH FGMDWAFVDP ATPVETGKKF CICVKEVLPW VMLPLQVVYV
DESRKSRKGP AHFGYGSGTL QGHLLAGEEK FSIELDGNGE VWYEITSFSK PAHFLSFLGY
PYVKLRQKHF ARHSSEAVLK HVNAS