U603_ORYSJ
ID U603_ORYSJ Reviewed; 299 AA.
AC Q6ATY4; A0A0P0WM46;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=UPF0603 protein Os05g0401100, chloroplastic;
DE Flags: Precursor;
GN OrderedLocusNames=Os05g0401100, LOC_Os05g33280; ORFNames=OSJNBa0035J16.9;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000250}; Single-pass membrane protein {ECO:0000250}; Lumenal side
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UPF0603 family. {ECO:0000305}.
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DR EMBL; AC135418; AAT85144.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF17400.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS93918.1; -; Genomic_DNA.
DR RefSeq; XP_015640458.1; XM_015784972.1.
DR AlphaFoldDB; Q6ATY4; -.
DR SMR; Q6ATY4; -.
DR BioGRID; 807766; 1.
DR STRING; 4530.OS05T0401100-01; -.
DR PaxDb; Q6ATY4; -.
DR PRIDE; Q6ATY4; -.
DR EnsemblPlants; Os05t0401100-01; Os05t0401100-01; Os05g0401100.
DR EnsemblPlants; Os05t0401100-02; Os05t0401100-02; Os05g0401100.
DR GeneID; 4338729; -.
DR Gramene; Os05t0401100-01; Os05t0401100-01; Os05g0401100.
DR Gramene; Os05t0401100-02; Os05t0401100-02; Os05g0401100.
DR KEGG; osa:4338729; -.
DR eggNOG; ENOG502QQ6F; Eukaryota.
DR HOGENOM; CLU_065264_0_1_1; -.
DR InParanoid; Q6ATY4; -.
DR OMA; IPMATYY; -.
DR OrthoDB; 1363895at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q6ATY4; OS.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0003993; F:acid phosphatase activity; IEA:EnsemblPlants.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0010206; P:photosystem II repair; IEA:EnsemblPlants.
DR InterPro; IPR007621; TPM_dom.
DR Pfam; PF04536; TPM_phosphatase; 1.
PE 3: Inferred from homology;
KW Chloroplast; Membrane; Plastid; Reference proteome; Thylakoid;
KW Transit peptide; Transmembrane; Transmembrane helix.
FT TRANSIT 1..41
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT TRANSIT 42..98
FT /note="Thylakoid"
FT /evidence="ECO:0000250"
FT CHAIN 99..299
FT /note="UPF0603 protein Os05g0401100, chloroplastic"
FT /id="PRO_0000342093"
FT TRANSMEM 276..296
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 244..265
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 23..41
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 250..265
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 299 AA; 31769 MW; 5CBE0D3C179AE8A3 CRC64;
METLLSPSTL LSPLRGSKKK PASPAASASS SSSSPARSVV SCALRRQQPP PQAVAAWRGD
GGRGGGVGSW ATFLQHGLAA AALSLAISMA PAPAPAVASE FDVLNGGPPE DTYVVDDAGV
LSRVTKSDVK RLVRDLESRK NIRINFITVR KLTSKADAFE YADQVLEKWY PTVEEGNNKG
IVVLVTSQKE GAITGGPAFV QAVGDEILDS TVSENLPVLA TDEKYNEAIY TTAKRLAAAI
DGLPDPGGPT FKDNKRESNF KTKEETEEKR GQFTLVVGGL LVIAFVVPMA QYYAYISKK