U79_HHV6H
ID U79_HHV6H Reviewed; 480 AA.
AC Q96896; O57141; O93113; Q785M1;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 22-JUL-2008, sequence version 2.
DT 23-FEB-2022, entry version 50.
DE RecName: Full=Protein U79/U80;
GN Name=U79/U80;
OS Human herpesvirus 6B (HHV-6 variant B) (Human B lymphotropic virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus.
OX NCBI_TaxID=32604;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9453140; DOI=10.1016/s0168-1702(97)00099-3;
RA Kosuge H., Isegawa Y., Yamanishi K.;
RT "Nucleotide sequence analysis of a 30-kilobase-pair region of human
RT herpesvirus-6B (HHV-6B) genome and strain-specific variations in major
RT immediate-early genes.";
RL Virus Res. 52:1-14(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10482554; DOI=10.1128/jvi.73.10.8053-8063.1999;
RA Isegawa Y., Mukai T., Nakano K., Kagawa M., Chen J., Mori Y., Sunagawa T.,
RA Kawanishi K., Sashihara J., Hata A., Zou P., Kosuge H., Yamanishi K.;
RT "Comparison of the complete DNA sequences of human herpesvirus 6 variants A
RT and B.";
RL J. Virol. 73:8053-8063(1999).
RN [3]
RP ALTERNATIVE SPLICING, AND SUBCELLULAR LOCATION.
RX PubMed=10860885; DOI=10.1006/viro.2000.0326;
RA Taniguchi T., Shimamoto T., Isegawa Y., Kondo K., Yamanishi K.;
RT "Structure of transcripts and proteins encoded by U79-80 of human
RT herpesvirus 6 and its subcellular localization in infected cells.";
RL Virology 271:307-320(2000).
CC -!- FUNCTION: May be involved in DNA replication. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000269|PubMed:10860885}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=4;
CC Name=1; Synonyms=clone 37;
CC IsoId=Q96896-1; Sequence=Displayed;
CC Name=2; Synonyms=clone 7;
CC IsoId=Q96896-2; Sequence=VSP_034623, VSP_034624;
CC Name=3; Synonyms=clone 27;
CC IsoId=Q96896-3; Sequence=VSP_034622, VSP_034627;
CC Name=4; Synonyms=clone 2;
CC IsoId=Q96896-4; Sequence=VSP_034625, VSP_034626;
CC -!- PTM: Not phosphorylated.
CC -!- MISCELLANEOUS: Isoform 1 belongs to the late class proteins. Isoform 2,
CC Isoform 3 and Isoform 4 belong to the early class proteins.
CC -!- SIMILARITY: Belongs to the herpesviridae U79/UL112 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC40328.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAC40329.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAA78299.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAA78300.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; U92288; AAC40328.1; ALT_SEQ; Genomic_DNA.
DR EMBL; U92288; AAC40329.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AB021506; BAA78299.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AB021506; BAA78300.1; ALT_SEQ; Genomic_DNA.
DR PIR; T44038; T44038.
DR PIR; T44039; T44039.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR004138; U79_P34.
DR Pfam; PF03064; U79_P34; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Host nucleus.
FT CHAIN 1..480
FT /note="Protein U79/U80"
FT /id="PRO_0000343650"
FT REGION 156..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 417..438
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 156..233
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 252..322
FT /note="ALSPCVSIDNHEDQQHDELDKRVYAQGTNREGLSNEDNYGNFQLNKSLEQLR
FT ARLVASSGEVVERSLSKLK -> RYLCVRLNRLSTCEYLKLKQRRTQEEFDNGPEQPSD
FT QQMVQSGSSVLFQDKTGAEHEDVAEGEFPGDGIPI (in isoform 3)"
FT /evidence="ECO:0000305"
FT /id="VSP_034622"
FT VAR_SEQ 252..259
FT /note="ALSPCVSI -> DEPRRSIQ (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_034623"
FT VAR_SEQ 260..480
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_034624"
FT VAR_SEQ 278..282
FT /note="GTNRE -> VGTCV (in isoform 4)"
FT /evidence="ECO:0000305"
FT /id="VSP_034625"
FT VAR_SEQ 283..480
FT /note="Missing (in isoform 4)"
FT /evidence="ECO:0000305"
FT /id="VSP_034626"
FT VAR_SEQ 323..480
FT /note="Missing (in isoform 3)"
FT /evidence="ECO:0000305"
FT /id="VSP_034627"
SQ SEQUENCE 480 AA; 54972 MW; 0F2CA9FE53F30C01 CRC64;
MYAEERGYGS FDNVIQAYEQ IISQSLHLKR FEFDNGCFIE FLADSGTCET FSKGWISMIY
WTSETDSMGS LTVDIGMDEG KCRTYRARGL LLCSKSITSI SQNTEGRERI LTVSHENGKL
QITFVTIAKV SSEPELRNLG DLKFMEKFEK ECRALDRKKH DDEHRKRSGK QKEKRKVEDI
DKKKEDEKLK QEEKKRNDED KRPDKKDEFD EPPKEKRQKS HHETKRNLEE QSHEDGIAPT
STTFVNGAVE GALSPCVSID NHEDQQHDEL DKRVYAQGTN REGLSNEDNY GNFQLNKSLE
QLRARLVASS GEVVERSLSK LKERLDYVKD NLIKNVLECA DVTVPSKCLS KTKHIEQKKQ
IVFSDCVRSV PVCEIKPFID MRVFETETTQ NARRVRQRTR TTVGSTDGAI GQQRVISGQN
RGRARGRGRG RVPRRRNSNL NNLRTQNSAI VIDDSSETEN FENAGSFNED LLATTILETL