UBID_VIBCH
ID UBID_VIBCH Reviewed; 613 AA.
AC Q9KV48;
DT 20-JUN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
DE EC=4.1.1.-;
DE AltName: Full=Polyprenyl p-hydroxybenzoate decarboxylase;
GN Name=ubiD; OrderedLocusNames=VC_0309;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
CC -!- FUNCTION: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy
CC benzoate to 2-octaprenylphenol. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000250};
CC -!- PATHWAY: Cofactor biosynthesis; ubiquinone biosynthesis.
CC -!- SUBUNIT: Homohexamer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Peripheral membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UbiD family. {ECO:0000305}.
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DR EMBL; AE003852; AAF93483.1; -; Genomic_DNA.
DR PIR; G82338; G82338.
DR RefSeq; NP_229964.1; NC_002505.1.
DR RefSeq; WP_001009479.1; NZ_LT906614.1.
DR AlphaFoldDB; Q9KV48; -.
DR SMR; Q9KV48; -.
DR STRING; 243277.VC_0309; -.
DR DNASU; 2614979; -.
DR EnsemblBacteria; AAF93483; AAF93483; VC_0309.
DR GeneID; 57739034; -.
DR KEGG; vch:VC_0309; -.
DR PATRIC; fig|243277.26.peg.290; -.
DR eggNOG; COG0043; Bacteria.
DR HOGENOM; CLU_023348_4_0_6; -.
DR OMA; SYQQFWG; -.
DR BioCyc; VCHO:VC0309-MON; -.
DR UniPathway; UPA00232; -.
DR Proteomes; UP000000584; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008694; F:3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity; IBA:GO_Central.
DR GO; GO:0016831; F:carboxy-lyase activity; IBA:GO_Central.
DR GO; GO:0006744; P:ubiquinone biosynthetic process; IBA:GO_Central.
DR InterPro; IPR002830; UbiD.
DR PANTHER; PTHR30108; PTHR30108; 2.
DR Pfam; PF01977; UbiD; 2.
DR TIGRFAMs; TIGR00148; TIGR00148; 1.
PE 3: Inferred from homology;
KW Cell membrane; Decarboxylase; Lyase; Membrane; Reference proteome;
KW Ubiquinone biosynthesis.
FT CHAIN 1..613
FT /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase"
FT /id="PRO_0000157366"
FT REGION 460..584
FT /note="Unknown insert"
SQ SEQUENCE 613 AA; 69242 MW; 92FFA10DDE43287B CRC64;
MNFKDLRDFL DYLEQRGELK RITHPIDPHY EMTEISDRTL RAKGPALLFE NPLGYDFPVL
TNLFGTPERV AMGMGRQQVQ ELRDVGQWLA YLKEPEPPRG LKELIEKLPV FKQVLNMPVK
RLRRAPCQEI VWQGDAVDLD KIPVMSCWPD DVAPLLTWGL TITRGPHKKR QNLGIYRQQK
IARNKVIMRW LAHRGGALDL RDWMEKHPGE PFPVSVAFGA DPATILGAVT PVPDTLSEYA
FAGLLRGSRT EVVKSISNDL EVPASAEIVL EGYIDPNEFA DEGPYGDHTG YYNEVERHHV
FTVTHVTMRN KPIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIAD FYLPPEGCSY
RMAIVTLKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVCDE QVNARDWPQV IAAMVNHMSP
LRDTLFIEHT PIDSLDFASP VVGLGSKIGL DATAKWPAEL AVSNSDQSDK TTELSLEALK
ACLSDEADVL DVALPEAAND KLVLLLINKQ EAGQAQQLLQ RVVDKLNGDS PLKFVILCDD
DVNIHDWNDV IWAMTTRMDP ARDSLRIVGQ DLICFDATNK LPDEVEREWG TPIRKDPKLV
AKIDSLWDEL GIV