UBID_VIBPA
ID UBID_VIBPA Reviewed; 617 AA.
AC Q87KI0;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 25-MAY-2022, entry version 96.
DE RecName: Full=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
DE EC=4.1.1.-;
DE AltName: Full=Polyprenyl p-hydroxybenzoate decarboxylase;
GN Name=ubiD; OrderedLocusNames=VP2997;
OS Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=223926;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RIMD 2210633;
RX PubMed=12620739; DOI=10.1016/s0140-6736(03)12659-1;
RA Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K.,
RA Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S.,
RA Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.;
RT "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
RT distinct from that of V. cholerae.";
RL Lancet 361:743-749(2003).
CC -!- FUNCTION: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy
CC benzoate to 2-octaprenylphenol. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000250};
CC -!- PATHWAY: Cofactor biosynthesis; ubiquinone biosynthesis.
CC -!- SUBUNIT: Homohexamer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Peripheral membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UbiD family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BA000031; BAC61260.1; -; Genomic_DNA.
DR RefSeq; NP_799376.1; NC_004603.1.
DR RefSeq; WP_005489172.1; NC_004603.1.
DR AlphaFoldDB; Q87KI0; -.
DR SMR; Q87KI0; -.
DR STRING; 223926.28808023; -.
DR EnsemblBacteria; BAC61260; BAC61260; BAC61260.
DR GeneID; 1190589; -.
DR KEGG; vpa:VP2997; -.
DR PATRIC; fig|223926.6.peg.2883; -.
DR eggNOG; COG0043; Bacteria.
DR HOGENOM; CLU_023348_4_0_6; -.
DR OMA; SYQQFWG; -.
DR UniPathway; UPA00232; -.
DR Proteomes; UP000002493; Chromosome 1.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016831; F:carboxy-lyase activity; IEA:UniProtKB-KW.
DR GO; GO:0006744; P:ubiquinone biosynthetic process; IEA:UniProtKB-UniPathway.
DR InterPro; IPR002830; UbiD.
DR PANTHER; PTHR30108; PTHR30108; 2.
DR Pfam; PF01977; UbiD; 2.
DR TIGRFAMs; TIGR00148; TIGR00148; 1.
PE 3: Inferred from homology;
KW Cell membrane; Decarboxylase; Lyase; Membrane; Reference proteome;
KW Ubiquinone biosynthesis.
FT CHAIN 1..617
FT /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase"
FT /id="PRO_0000267706"
FT REGION 460..588
FT /note="Unknown insert"
SQ SEQUENCE 617 AA; 69830 MW; 97A565E4A6CB0F49 CRC64;
MSFKDLREFI DHLEQKGRLK RITHPVDPAY EMTEISDRTL RAGGPALLFE NPIGYNVPVL
TNLFGTPERV AIGMGREDVK ELREVGKLLA YLKEPEPPKG FKDALEKLPV FKQVLNMPAK
RLRKAPCQDI VWQGDEVDLD KIPVMSCWAE DVAPLLTWGL TVTKGPNKKR QNLGIYRQQK
IAKNKIIMRW LAHRGGALDL RDWMETNPGK PFPVSVAFGA DPATILGAVT PVPDTLSEYA
FAGLLRGSKT EVVKSISNDL EVPASAEIVM EGYIDPNEFA DEGPYGDHTG YYNEKEKHHV
FTITHITMRK DPIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIED FYLPPEGCSY
RMAVVTMKKQ YPGHAKRVMM GVWSFLRQFM YTKFVIVCDE SVNARDWNDV VKAMTEHMDP
VRDTLMIDNT PIDSLDFASP VVGLGSKMGL DATIKWDAEL ATRPQISKQD SKVITEADLE
SLKQQRPEII DIYLPPTTNN RFAVVTMKKD QAGQSQALME YLWDFFAQYT DNKFVILCDE
DVNARDWNDI IWAVTTRMDP DRDTTRVSGK AESSSKLGLD ATNKFESEVT REWGTPIKKD
PKLVAKVDEI WDQLGIL