UBL5_ARATH
ID UBL5_ARATH Reviewed; 73 AA.
AC Q9FGZ9;
DT 13-SEP-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Ubiquitin-like protein 5;
GN Name=UBL5; OrderedLocusNames=At5g42300; ORFNames=K5J14.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB023032; BAB10203.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94793.1; -; Genomic_DNA.
DR EMBL; AY072534; AAL66949.1; -; mRNA.
DR EMBL; AF370527; AAK48954.1; -; mRNA.
DR RefSeq; NP_199045.1; NM_123595.4.
DR AlphaFoldDB; Q9FGZ9; -.
DR SMR; Q9FGZ9; -.
DR BioGRID; 19485; 2.
DR IntAct; Q9FGZ9; 2.
DR STRING; 3702.AT5G42300.1; -.
DR iPTMnet; Q9FGZ9; -.
DR PaxDb; Q9FGZ9; -.
DR PRIDE; Q9FGZ9; -.
DR ProteomicsDB; 233044; -.
DR EnsemblPlants; AT5G42300.1; AT5G42300.1; AT5G42300.
DR GeneID; 834235; -.
DR Gramene; AT5G42300.1; AT5G42300.1; AT5G42300.
DR KEGG; ath:AT5G42300; -.
DR Araport; AT5G42300; -.
DR TAIR; locus:2157597; AT5G42300.
DR eggNOG; KOG3493; Eukaryota.
DR HOGENOM; CLU_156193_2_0_1; -.
DR InParanoid; Q9FGZ9; -.
DR OMA; HIKLEDY; -.
DR PhylomeDB; Q9FGZ9; -.
DR PRO; PR:Q9FGZ9; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FGZ9; baseline and differential.
DR Genevisible; Q9FGZ9; AT.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0031386; F:protein tag; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR GO; GO:0036211; P:protein modification process; IBA:GO_Central.
DR GO; GO:0008380; P:RNA splicing; IMP:TAIR.
DR InterPro; IPR039732; Hub1/Ubl5.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR13042; PTHR13042; 1.
DR Pfam; PF00240; ubiquitin; 1.
DR SUPFAM; SSF54236; SSF54236; 1.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Reference proteome; Ubl conjugation pathway.
FT CHAIN 1..73
FT /note="Ubiquitin-like protein 5"
FT /id="PRO_0000114873"
FT DOMAIN 1..73
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00214"
SQ SEQUENCE 73 AA; 8571 MW; 4F20C6ED077133F6 CRC64;
MIEVVLNDRL GKKVRVKCND DDTIGDLKKL VAAQTGTRAE KIRIQKWYNI YKDHITLKDY
EIHDGMGLEL YYN