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UBXN1_HUMAN
ID   UBXN1_HUMAN             Reviewed;         297 AA.
AC   Q04323; Q9BV93; Q9BVV5;
DT   01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT   16-MAY-2003, sequence version 2.
DT   03-AUG-2022, entry version 176.
DE   RecName: Full=UBX domain-containing protein 1;
DE   AltName: Full=SAPK substrate protein 1;
DE   AltName: Full=UBA/UBX 33.3 kDa protein;
GN   Name=UBXN1; Synonyms=SAKS1;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
RA   Pollard K.M.;
RL   Submitted (JUN-1991) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC   TISSUE=Colon, Placenta, and Skin;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [3]
RP   PROTEIN SEQUENCE OF 220-231 AND 276-285, PHOSPHORYLATION AT SER-200, AND
RP   INTERACTION WITH VCP.
RX   PubMed=15362974; DOI=10.1042/bj20041498;
RA   McNeill H., Knebel A., Arthur J.S., Cuenda A., Cohen P.;
RT   "A novel UBA and UBX domain protein that binds polyubiquitin and VCP and is
RT   a substrate for SAPKs.";
RL   Biochem. J. 384:391-400(2004).
RN   [4]
RP   PROTEIN SEQUENCE OF 220-231, AND IDENTIFICATION BY MASS SPECTROMETRY.
RC   TISSUE=Fetal brain cortex;
RA   Lubec G., Chen W.-Q., Sun Y.;
RL   Submitted (DEC-2008) to UniProtKB.
RN   [5]
RP   UBIQUITIN-BINDING, AND INTERACTION WITH VCP.
RX   PubMed=18775313; DOI=10.1016/j.cell.2008.06.048;
RA   Alexandru G., Graumann J., Smith G.T., Kolawa N.J., Fang R., Deshaies R.J.;
RT   "UBXD7 binds multiple ubiquitin ligases and implicates p97 in HIF1alpha
RT   turnover.";
RL   Cell 134:804-816(2008).
RN   [6]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-199, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=18669648; DOI=10.1073/pnas.0805139105;
RA   Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,
RA   Elledge S.J., Gygi S.P.;
RT   "A quantitative atlas of mitotic phosphorylation.";
RL   Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
RN   [7]
RP   ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, CLEAVAGE OF INITIATOR
RP   METHIONINE [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY MASS SPECTROMETRY
RP   [LARGE SCALE ANALYSIS].
RX   PubMed=19413330; DOI=10.1021/ac9004309;
RA   Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.;
RT   "Lys-N and trypsin cover complementary parts of the phosphoproteome in a
RT   refined SCX-based approach.";
RL   Anal. Chem. 81:4493-4501(2009).
RN   [8]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-270, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Leukemic T-cell;
RX   PubMed=19690332; DOI=10.1126/scisignal.2000007;
RA   Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,
RA   Rodionov V., Han D.K.;
RT   "Quantitative phosphoproteomic analysis of T cell receptor signaling
RT   reveals system-wide modulation of protein-protein interactions.";
RL   Sci. Signal. 2:RA46-RA46(2009).
RN   [9]
RP   UBIQUITIN-BINDING, DOMAIN UBA, INTERACTION WITH BRCA1 AND BARD1,
RP   MUTAGENESIS OF MET-13 AND ARG-219, AND FUNCTION.
RX   PubMed=20351172; DOI=10.1128/mcb.01056-09;
RA   Wu-Baer F., Ludwig T., Baer R.;
RT   "The UBXN1 protein associates with autoubiquitinated forms of the BRCA1
RT   tumor suppressor and inhibits its enzymatic function.";
RL   Mol. Cell. Biol. 30:2787-2798(2010).
RN   [10]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=20068231; DOI=10.1126/scisignal.2000475;
RA   Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L.,
RA   Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.;
RT   "Quantitative phosphoproteomics reveals widespread full phosphorylation
RT   site occupancy during mitosis.";
RL   Sci. Signal. 3:RA3-RA3(2010).
RN   [11]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA   Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T.,
RA   Bennett K.L., Superti-Furga G., Colinge J.;
RT   "Initial characterization of the human central proteome.";
RL   BMC Syst. Biol. 5:17-17(2011).
RN   [12]
RP   FUNCTION, SUBCELLULAR LOCATION, AND INTERACTION WITH MAVS.
RX   PubMed=23545497; DOI=10.1016/j.celrep.2013.02.027;
RA   Wang P., Yang L., Cheng G., Yang G., Xu Z., You F., Sun Q., Lin R.,
RA   Fikrig E., Sutton R.E.;
RT   "UBXN1 interferes with Rig-I-like receptor-mediated antiviral immune
RT   response by targeting MAVS.";
RL   Cell Rep. 3:1057-1070(2013).
RN   [13]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-229, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma, and Erythroleukemia;
RX   PubMed=23186163; DOI=10.1021/pr300630k;
RA   Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
RA   Mohammed S.;
RT   "Toward a comprehensive characterization of a human cancer cell
RT   phosphoproteome.";
RL   J. Proteome Res. 12:260-271(2013).
RN   [14]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-207 AND SER-270, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Liver;
RX   PubMed=24275569; DOI=10.1016/j.jprot.2013.11.014;
RA   Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L.,
RA   Ye M., Zou H.;
RT   "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver
RT   phosphoproteome.";
RL   J. Proteomics 96:253-262(2014).
RN   [15]
RP   FUNCTION, AND INTERACTION WITH BIRC2.
RX   PubMed=25681446; DOI=10.1074/jbc.m114.631689;
RA   Wang Y.B., Tan B., Mu R., Chang Y., Wu M., Tu H.Q., Zhang Y.C., Guo S.S.,
RA   Qin X.H., Li T., Li W.H., Li A.L., Zhang X.M., Li H.Y.;
RT   "Ubiquitin-associated domain-containing ubiquitin regulatory X (UBX)
RT   protein UBXN1 is a negative regulator of nuclear factor kappaB (NF-kappaB)
RT   signaling.";
RL   J. Biol. Chem. 290:10395-10405(2015).
RN   [16]
RP   ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, CLEAVAGE OF INITIATOR
RP   METHIONINE [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY MASS SPECTROMETRY
RP   [LARGE SCALE ANALYSIS].
RX   PubMed=25944712; DOI=10.1002/pmic.201400617;
RA   Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D.,
RA   Lane L., Bairoch A., Van Dorsselaer A., Carapito C.;
RT   "N-terminome analysis of the human mitochondrial proteome.";
RL   Proteomics 15:2519-2524(2015).
RN   [17]
RP   FUNCTION, AND INTERACTION WITH CUL1.
RX   PubMed=28152074; DOI=10.1371/journal.ppat.1006187;
RA   Hu Y., O'Boyle K., Auer J., Raju S., You F., Wang P., Fikrig E.,
RA   Sutton R.E.;
RT   "Multiple UBXN family members inhibit retrovirus and lentivirus production
RT   and canonical NFkappaBeta signaling by stabilizing IkappaBalpha.";
RL   PLoS Pathog. 13:E1006187-E1006187(2017).
RN   [18]
RP   INTERACTION WITH NIPAH VIRUS PROTEIN V (MICROBIAL INFECTION).
RX   PubMed=29769705; DOI=10.1038/s41598-018-25815-9;
RA   Uchida S., Horie R., Sato H., Kai C., Yoneda M.;
RT   "Possible role of the Nipah virus V protein in the regulation of the
RT   interferon beta induction by interacting with UBX domain-containing
RT   protein1.";
RL   Sci. Rep. 8:7682-7682(2018).
CC   -!- FUNCTION: Ubiquitin-binding protein that plays a role in the modulation
CC       of innate immune response. Blocks both the RIG-I-like receptors (RLR)
CC       and NF-kappa-B pathways. Following viral infection, UBXN1 is induced
CC       and recruited to the RLR component MAVS. In turn, interferes with MAVS
CC       oligomerization, and disrupts the MAVS/TRAF3/TRAF6 signalosome. This
CC       function probably serves as a brake to prevent excessive RLR signaling
CC       (PubMed:23545497). Interferes with the TNFalpha-triggered NF-kappa-B
CC       pathway by interacting with cellular inhibitors of apoptosis proteins
CC       (cIAPs) and thereby inhibiting their recruitment to TNFR1
CC       (PubMed:25681446). Prevents also the activation of NF-kappa-B by
CC       associating with CUL1 and thus inhibiting NF-kappa-B inhibitor
CC       alpha/NFKBIA degradation that remains bound to NF-kappa-B
CC       (PubMed:28152074). Interacts with the BRCA1-BARD1 heterodimer and
CC       regulates its activity. Specifically binds 'Lys-6'-linked polyubiquitin
CC       chains. Interaction with autoubiquitinated BRCA1 leads to the
CC       inhibition of the E3 ubiquitin-protein ligase activity of the BRCA1-
CC       BARD1 heterodimer (PubMed:20351172). Component of a complex required to
CC       couple deglycosylation and proteasome-mediated degradation of misfolded
CC       proteins in the endoplasmic reticulum that are retrotranslocated in the
CC       cytosol. {ECO:0000269|PubMed:20351172, ECO:0000269|PubMed:23545497,
CC       ECO:0000269|PubMed:25681446, ECO:0000269|PubMed:28152074}.
CC   -!- SUBUNIT: Interacts with MAVS; this interaction prevents MAVS
CC       oligomerization and thus disrupts the RLR signaling pathway
CC       (PubMed:23545497). Interacts with CUL1; this interaction inhibits CUL1-
CC       mediated degradation of NF-kappa-B inhibitors (PubMed:28152074).
CC       Interacts with BIRC2/c-IAP1; this interaction prevents TNFalpha-
CC       stimulated RIP1 ubiquitination and subsequent NF-kappa-B activation
CC       (PubMed:25681446). Component of a complex required to couple
CC       retrotranslocation, ubiquitination and deglycosylation composed of
CC       NGLY1, SAKS1, AMFR, VCP and RAD23B. Interacts with HOMER2 (By
CC       similarity). Interacts directly with VCP. Interacts with BRCA1 and
CC       BARD1; interaction takes place when BRCA1 is not autoubiquitinated but
CC       is strongly enhanced in the presence of autoubiquitinated BRCA1.
CC       {ECO:0000250|UniProtKB:Q922Y1, ECO:0000269|PubMed:15362974,
CC       ECO:0000269|PubMed:18775313, ECO:0000269|PubMed:20351172,
CC       ECO:0000269|PubMed:23545497, ECO:0000269|PubMed:25681446,
CC       ECO:0000269|PubMed:28152074}.
CC   -!- SUBUNIT: (Microbial infection) Interacts (via C-terminal UBX domain)
CC       with nipah virus protein V. {ECO:0000269|PubMed:29769705}.
CC   -!- INTERACTION:
CC       Q04323; V9HW80: HEL-S-70; NbExp=3; IntAct=EBI-1058647, EBI-10175326;
CC       Q04323; Q9Y263: PLAA; NbExp=5; IntAct=EBI-1058647, EBI-1994037;
CC       Q04323; Q9HCM9: TRIM39; NbExp=3; IntAct=EBI-1058647, EBI-739510;
CC       Q04323; Q7KZS0: UBE2I; NbExp=3; IntAct=EBI-1058647, EBI-10180829;
CC       Q04323; Q9UMX0: UBQLN1; NbExp=3; IntAct=EBI-1058647, EBI-741480;
CC       Q04323; Q9UMX0-2: UBQLN1; NbExp=3; IntAct=EBI-1058647, EBI-10173939;
CC       Q04323; Q8WU02; NbExp=3; IntAct=EBI-1058647, EBI-747182;
CC       Q04323-2; O00154-4: ACOT7; NbExp=3; IntAct=EBI-11530712, EBI-12007918;
CC       Q04323-2; Q14203-5: DCTN1; NbExp=3; IntAct=EBI-11530712, EBI-25840379;
CC       Q04323-2; Q08426: EHHADH; NbExp=3; IntAct=EBI-11530712, EBI-2339219;
CC       Q04323-2; P04792: HSPB1; NbExp=3; IntAct=EBI-11530712, EBI-352682;
CC       Q04323-2; Q9UBY9: HSPB7; NbExp=3; IntAct=EBI-11530712, EBI-739361;
CC       Q04323-2; O60333-2: KIF1B; NbExp=3; IntAct=EBI-11530712, EBI-10975473;
CC       Q04323-2; P02545: LMNA; NbExp=3; IntAct=EBI-11530712, EBI-351935;
CC       Q04323-2; Q9Y263: PLAA; NbExp=3; IntAct=EBI-11530712, EBI-1994037;
CC       Q04323-2; Q9BUI4: POLR3C; NbExp=3; IntAct=EBI-11530712, EBI-5452779;
CC       Q04323-2; O60260-5: PRKN; NbExp=3; IntAct=EBI-11530712, EBI-21251460;
CC       Q04323-2; P54725: RAD23A; NbExp=3; IntAct=EBI-11530712, EBI-746453;
CC       Q04323-2; Q9Y3C5: RNF11; NbExp=3; IntAct=EBI-11530712, EBI-396669;
CC       Q04323-2; P37840: SNCA; NbExp=3; IntAct=EBI-11530712, EBI-985879;
CC       Q04323-2; Q9UHD9: UBQLN2; NbExp=3; IntAct=EBI-11530712, EBI-947187;
CC       Q04323-2; O76024: WFS1; NbExp=3; IntAct=EBI-11530712, EBI-720609;
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:23545497}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q04323-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q04323-2; Sequence=VSP_020367;
CC   -!- DOMAIN: The UBA domain specifically recognizes and binds 'Lys-6'-linked
CC       polyubiquitin chains. {ECO:0000269|PubMed:20351172}.
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DR   EMBL; M68864; AAA36396.1; -; mRNA.
DR   EMBL; BC000902; AAH00902.1; -; mRNA.
DR   EMBL; BC001372; AAH01372.1; -; mRNA.
DR   EMBL; BC040129; AAH40129.1; -; mRNA.
DR   CCDS; CCDS66105.1; -. [Q04323-1]
DR   CCDS; CCDS8029.1; -. [Q04323-2]
DR   PIR; S27965; S27965.
DR   RefSeq; NP_001273006.1; NM_001286077.1. [Q04323-1]
DR   RefSeq; NP_001273007.1; NM_001286078.1.
DR   RefSeq; NP_056937.2; NM_015853.4. [Q04323-2]
DR   RefSeq; XP_005274090.1; XM_005274033.4. [Q04323-2]
DR   RefSeq; XP_016873363.1; XM_017017874.1. [Q04323-1]
DR   AlphaFoldDB; Q04323; -.
DR   SMR; Q04323; -.
DR   BioGRID; 119239; 195.
DR   DIP; DIP-29467N; -.
DR   IntAct; Q04323; 75.
DR   MINT; Q04323; -.
DR   STRING; 9606.ENSP00000294119; -.
DR   MEROPS; X36.001; -.
DR   GlyGen; Q04323; 1 site, 1 O-linked glycan (1 site).
DR   iPTMnet; Q04323; -.
DR   MetOSite; Q04323; -.
DR   PhosphoSitePlus; Q04323; -.
DR   BioMuta; UBXN1; -.
DR   DMDM; 30923268; -.
DR   EPD; Q04323; -.
DR   jPOST; Q04323; -.
DR   MassIVE; Q04323; -.
DR   MaxQB; Q04323; -.
DR   PaxDb; Q04323; -.
DR   PeptideAtlas; Q04323; -.
DR   PRIDE; Q04323; -.
DR   ProteomicsDB; 58240; -. [Q04323-1]
DR   ProteomicsDB; 58241; -. [Q04323-2]
DR   Antibodypedia; 1591; 126 antibodies from 22 providers.
DR   DNASU; 51035; -.
DR   Ensembl; ENST00000294119.6; ENSP00000294119.2; ENSG00000162191.14. [Q04323-2]
DR   Ensembl; ENST00000301935.10; ENSP00000303991.5; ENSG00000162191.14. [Q04323-1]
DR   GeneID; 51035; -.
DR   KEGG; hsa:51035; -.
DR   MANE-Select; ENST00000301935.10; ENSP00000303991.5; NM_001286077.2; NP_001273006.1.
DR   UCSC; uc001nuj.5; human. [Q04323-1]
DR   CTD; 51035; -.
DR   DisGeNET; 51035; -.
DR   GeneCards; UBXN1; -.
DR   HGNC; HGNC:18402; UBXN1.
DR   HPA; ENSG00000162191; Low tissue specificity.
DR   MIM; 616378; gene.
DR   neXtProt; NX_Q04323; -.
DR   OpenTargets; ENSG00000162191; -.
DR   PharmGKB; PA162408336; -.
DR   VEuPathDB; HostDB:ENSG00000162191; -.
DR   eggNOG; KOG2689; Eukaryota.
DR   GeneTree; ENSGT00940000156457; -.
DR   InParanoid; Q04323; -.
DR   OMA; AQHFPRK; -.
DR   PhylomeDB; Q04323; -.
DR   TreeFam; TF313944; -.
DR   PathwayCommons; Q04323; -.
DR   Reactome; R-HSA-532668; N-glycan trimming in the ER and Calnexin/Calreticulin cycle.
DR   Reactome; R-HSA-5693565; Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks.
DR   SignaLink; Q04323; -.
DR   SIGNOR; Q04323; -.
DR   BioGRID-ORCS; 51035; 21 hits in 1082 CRISPR screens.
DR   ChiTaRS; UBXN1; human.
DR   GenomeRNAi; 51035; -.
DR   Pharos; Q04323; Tbio.
DR   PRO; PR:Q04323; -.
DR   Proteomes; UP000005640; Chromosome 11.
DR   RNAct; Q04323; protein.
DR   Bgee; ENSG00000162191; Expressed in mucosa of stomach and 208 other tissues.
DR   ExpressionAtlas; Q04323; baseline and differential.
DR   Genevisible; Q04323; HS.
DR   GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
DR   GO; GO:0005829; C:cytosol; IDA:ParkinsonsUK-UCL.
DR   GO; GO:0005783; C:endoplasmic reticulum; IDA:ParkinsonsUK-UCL.
DR   GO; GO:0005654; C:nucleoplasm; IDA:HPA.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0034098; C:VCP-NPL4-UFD1 AAA ATPase complex; IDA:BHF-UCL.
DR   GO; GO:0051117; F:ATPase binding; IPI:UniProtKB.
DR   GO; GO:0036435; F:K48-linked polyubiquitin modification-dependent protein binding; IDA:ParkinsonsUK-UCL.
DR   GO; GO:0071796; F:K6-linked polyubiquitin modification-dependent protein binding; IDA:UniProtKB.
DR   GO; GO:0031593; F:polyubiquitin modification-dependent protein binding; IDA:UniProtKB.
DR   GO; GO:1904855; F:proteasome regulatory particle binding; IDA:UniProtKB.
DR   GO; GO:0043130; F:ubiquitin binding; IDA:BHF-UCL.
DR   GO; GO:0031625; F:ubiquitin protein ligase binding; IDA:BHF-UCL.
DR   GO; GO:1904293; P:negative regulation of ERAD pathway; IMP:ParkinsonsUK-UCL.
DR   GO; GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
DR   GO; GO:1903094; P:negative regulation of protein K48-linked deubiquitination; IDA:ParkinsonsUK-UCL.
DR   GO; GO:0031397; P:negative regulation of protein ubiquitination; IDA:UniProtKB.
DR   GO; GO:2000157; P:negative regulation of ubiquitin-specific protease activity; IDA:ParkinsonsUK-UCL.
DR   GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; NAS:UniProtKB.
DR   CDD; cd14302; UBA_UBXN1; 1.
DR   InterPro; IPR015940; UBA.
DR   InterPro; IPR009060; UBA-like_sf.
DR   InterPro; IPR041923; UBA_UBXN1.
DR   InterPro; IPR029071; Ubiquitin-like_domsf.
DR   InterPro; IPR001012; UBX_dom.
DR   Pfam; PF00627; UBA; 1.
DR   Pfam; PF00789; UBX; 1.
DR   SMART; SM00165; UBA; 1.
DR   SMART; SM00166; UBX; 1.
DR   SUPFAM; SSF46934; SSF46934; 1.
DR   SUPFAM; SSF54236; SSF54236; 1.
DR   PROSITE; PS50030; UBA; 1.
DR   PROSITE; PS50033; UBX; 1.
PE   1: Evidence at protein level;
KW   Acetylation; Alternative splicing; Coiled coil; Cytoplasm;
KW   Direct protein sequencing; Host-virus interaction; Phosphoprotein;
KW   Reference proteome.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0007744|PubMed:19413330,
FT                   ECO:0007744|PubMed:25944712"
FT   CHAIN           2..297
FT                   /note="UBX domain-containing protein 1"
FT                   /id="PRO_0000211023"
FT   DOMAIN          2..42
FT                   /note="UBA"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00212"
FT   DOMAIN          211..293
FT                   /note="UBX"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00215"
FT   REGION          41..211
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          43..297
FT                   /note="Interaction with BRCA1"
FT                   /evidence="ECO:0000269|PubMed:20351172"
FT   COILED          87..172
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        84..178
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        187..203
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         2
FT                   /note="N-acetylalanine"
FT                   /evidence="ECO:0007744|PubMed:19413330,
FT                   ECO:0007744|PubMed:25944712"
FT   MOD_RES         199
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648"
FT   MOD_RES         200
FT                   /note="Phosphoserine; by MAPK12"
FT                   /evidence="ECO:0000269|PubMed:15362974"
FT   MOD_RES         207
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:24275569"
FT   MOD_RES         229
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         270
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19690332,
FT                   ECO:0007744|PubMed:24275569"
FT   VAR_SEQ         283..297
FT                   /note="LVPSAVLIVAKKCPS -> MAARLETRTRNWGSREACLGKGGMQREGAL
FT                   (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_020367"
FT   VARIANT         56
FT                   /note="L -> F (in dbSNP:rs11543359)"
FT                   /id="VAR_057370"
FT   MUTAGEN         13
FT                   /note="M->T: Abolishes binding to 'Lys-6'-linked
FT                   polyubiquitin chains and ability to inhibit E3 ubiquitin-
FT                   protein ligase activity of the BRCA1-BARD1 heterodimer."
FT                   /evidence="ECO:0000269|PubMed:20351172"
FT   MUTAGEN         219
FT                   /note="R->A: Does not affect binding to 'Lys-6'-linked
FT                   polyubiquitin chains and ability to inhibit E3 ubiquitin-
FT                   protein ligase activity of the BRCA1-BARD1 heterodimer."
FT                   /evidence="ECO:0000269|PubMed:20351172"
FT   CONFLICT        76
FT                   /note="G -> A (in Ref. 1; AAA36396)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        148
FT                   /note="E -> AE (in Ref. 1; AAA36396)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        154
FT                   /note="K -> N (in Ref. 1; AAA36396)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   297 AA;  33325 MW;  E4E0C8BBAC93F2BB CRC64;
     MAELTALESL IEMGFPRGRA EKALALTGNQ GIEAAMDWLM EHEDDPDVDE PLETPLGHIL
     GREPTSSEQG GLEGSGSAAG EGKPALSEEE RQEQTKRMLE LVAQKQRERE EREEREALER
     ERQRRRQGQE LSAARQRLQE DEMRRAAEER RREKAEELAA RQRVREKIER DKAERAKKYG
     GSVGSQPPPV APEPGPVPSS PSQEPPTKRE YDQCRIQVRL PDGTSLTQTF RAREQLAAVR
     LYVELHRGEE LGGGQDPVQL LSGFPRRAFS EADMERPLQE LGLVPSAVLI VAKKCPS
 
 
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