UFL1_ORYSJ
ID UFL1_ORYSJ Reviewed; 812 AA.
AC B9FM64; A0A0P0WHI1; C7J268; Q5W7C7;
DT 02-MAR-2010, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 58.
DE RecName: Full=E3 UFM1-protein ligase 1 homolog;
DE EC=2.3.2.-;
DE AltName: Full=E3 UFM1-protein transferase 1 homolog {ECO:0000305};
GN OrderedLocusNames=Os05g0117600, LOC_Os05g02650;
GN ORFNames=OsJ_16906, P0496H07.16;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: E3 UFM1-protein ligase that mediates ufmylation of target
CC proteins. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UFL1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAV44207.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAH92912.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC078977; AAV44207.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008211; BAH92912.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014961; BAS91987.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE62120.1; -; Genomic_DNA.
DR RefSeq; XP_015639193.1; XM_015783707.1.
DR AlphaFoldDB; B9FM64; -.
DR SMR; B9FM64; -.
DR STRING; 4530.OS05T0117600-00; -.
DR PaxDb; B9FM64; -.
DR PRIDE; B9FM64; -.
DR EnsemblPlants; Os05t0117600-00; Os05t0117600-00; Os05g0117600.
DR GeneID; 9266232; -.
DR Gramene; Os05t0117600-00; Os05t0117600-00; Os05g0117600.
DR KEGG; osa:9266232; -.
DR eggNOG; KOG2235; Eukaryota.
DR HOGENOM; CLU_012417_0_0_1; -.
DR InParanoid; B9FM64; -.
DR OMA; NECSATK; -.
DR OrthoDB; 289380at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; B9FM64; OS.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0061666; F:UFM1 ligase activity; IEA:InterPro.
DR GO; GO:0071568; F:UFM1 transferase activity; IBA:GO_Central.
DR GO; GO:1990592; P:protein K69-linked ufmylation; IBA:GO_Central.
DR GO; GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR GO; GO:0034976; P:response to endoplasmic reticulum stress; IBA:GO_Central.
DR InterPro; IPR018611; Ufl1.
DR PANTHER; PTHR31057; PTHR31057; 1.
DR Pfam; PF09743; E3_UFM1_ligase; 1.
PE 3: Inferred from homology;
KW Reference proteome; Transferase; Ubl conjugation pathway.
FT CHAIN 1..812
FT /note="E3 UFM1-protein ligase 1 homolog"
FT /id="PRO_0000391896"
FT REGION 389..495
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 443..460
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 467..495
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 812 AA; 89276 MW; 640C7290B020E07E CRC64;
MDAELLELQR QLEAAQSARS SVRLSERNVV ELVQKLQERG IIDFELLHTT SGKEYITSDH
LKHEIKMEIK KRGRASLVDL SDILGVDLYH VERQSQKVVA DDPSLMLING EIMSQSYWDT
VTEEINEKLQ ERSQIALAEI AAQLHIGSEL VVNILEPRLG TIVKGRLEGG QLYTPAYVSR
ITAMVRGAAR GITVPTNLPS VWNSLQLQLQ EMHGASGVSV EGSFFQSIFN GLLKEGVVLG
SVRAGVQWTP AVFAHAQKES VDAFFSQNSY IGYEVLQKLA IPQPKQYLEA RYPDGIALEA
VFVHPSVVDM LDAAVGDTIE NGQWIDALSV LPSYITGPDA TKILSLCPSL QKAIKSSKAV
VFGESCVFSN AFIKGIFDRL EKEMDSFGIK HSAGQGKPSN MSSEHRIGSD GKDLGDNDTS
SIGASSDKGP KKKRGKVSGS AKGAAVEKDD DNEESIPVKG KKAHRKNKDA GSSGDAKHGG
KKASEKTKED NTNIFPDDLI EQKVLTVAPE LEELGGSDDL NGPLKLLSSH LRPMLMDAWM
KKRNTMLSEN AERRRRLLDN LQKQLDEAVL DMQLYEKSLD VFEDDPATSA ILHKHLLRTM
GAPVVDKILL TLHKDNKLKN GMDVEDSEEN VQLSTADRTS LAKDLPGSLS VKAQALAETL
EGKRFDSFMD ALRDTAEESG LLFKKLDKRL ERSMLHSYRK DLTAQVSSEN DPISFLPKVV
ALLFLQAYNK ALQAPGRAVG AVIALLKDKI PAPTYKVLAD YHSTTVKVLA LQAAATEDGE
DCATDRMLER KEDLEERLMP ELKSLVLGTS KE