UFM1_ARATH
ID UFM1_ARATH Reviewed; 93 AA.
AC Q9CA23;
DT 31-JAN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 112.
DE RecName: Full=Ubiquitin-fold modifier 1;
DE Flags: Precursor;
GN OrderedLocusNames=At1g77710; ORFNames=T32E8.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- FUNCTION: Ubiquitin-like modifier protein which binds to a number of as
CC yet unidentified target proteins. {ECO:0000250}.
CC -!- INTERACTION:
CC Q9CA23; O23160: MYB73; NbExp=3; IntAct=EBI-4439204, EBI-25506855;
CC -!- SIMILARITY: Belongs to the UFM1 family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC012193; AAG51633.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36012.1; -; Genomic_DNA.
DR EMBL; AY093089; AAM13088.1; -; mRNA.
DR EMBL; BT000097; AAN15416.1; -; mRNA.
DR PIR; H96806; H96806.
DR RefSeq; NP_177894.1; NM_106420.5.
DR AlphaFoldDB; Q9CA23; -.
DR SMR; Q9CA23; -.
DR BioGRID; 29326; 3.
DR IntAct; Q9CA23; 3.
DR STRING; 3702.AT1G77710.1; -.
DR PaxDb; Q9CA23; -.
DR PRIDE; Q9CA23; -.
DR ProteomicsDB; 245293; -.
DR EnsemblPlants; AT1G77710.1; AT1G77710.1; AT1G77710.
DR GeneID; 844107; -.
DR Gramene; AT1G77710.1; AT1G77710.1; AT1G77710.
DR KEGG; ath:AT1G77710; -.
DR Araport; AT1G77710; -.
DR TAIR; locus:2203246; AT1G77710.
DR eggNOG; KOG3483; Eukaryota.
DR HOGENOM; CLU_175114_0_0_1; -.
DR InParanoid; Q9CA23; -.
DR OMA; INPAQNA; -.
DR OrthoDB; 1575050at2759; -.
DR PhylomeDB; Q9CA23; -.
DR PRO; PR:Q9CA23; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9CA23; baseline and differential.
DR Genevisible; Q9CA23; AT.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:1990592; P:protein K69-linked ufmylation; IBA:GO_Central.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR005375; UFM1.
DR PANTHER; PTHR15825; PTHR15825; 1.
DR Pfam; PF03671; Ufm1; 1.
DR PIRSF; PIRSF038027; Ubiquitin-like_Ufm1; 1.
DR SUPFAM; SSF54236; SSF54236; 1.
PE 1: Evidence at protein level;
KW Isopeptide bond; Reference proteome; Ubl conjugation pathway.
FT CHAIN 1..86
FT /note="Ubiquitin-fold modifier 1"
FT /id="PRO_0000042142"
FT PROPEP 87..93
FT /note="Removed in mature form"
FT /evidence="ECO:0000250"
FT /id="PRO_0000042143"
FT CROSSLNK 86
FT /note="Glycyl lysine isopeptide (Gly-Lys) (interchain with
FT K-? in acceptor proteins)"
FT /evidence="ECO:0000255"
SQ SEQUENCE 93 AA; 9929 MW; 0BDAE0CCF9002470 CRC64;
MATGGKVSFK VTLTSDPKLP FKVFSVPEGA PFTAVLKFAA EEFKVPPQTS AIITNDGIGI
NPQQSAGNVF LKHGSELRLI PRDRVGAVFV MDP
