ID   UFSP_ORYSJ              Reviewed;         640 AA.
AC   Q0INW1; A0A0P0Y940; Q2QTR5;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   20-MAR-2007, sequence version 2.
DT   03-AUG-2022, entry version 90.
DE   RecName: Full=Probable Ufm1-specific protease;
DE            Short=UfSP;
DE            EC=3.4.22.-;
GN   OrderedLocusNames=Os12g0285500, LOC_Os12g18760;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG   The rice chromosomes 11 and 12 sequencing consortia;
RT   "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT   genes and recent gene duplications.";
RL   BMC Biol. 3:20-20(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RG   The rice full-length cDNA consortium;
RT   "Oryza sativa full length cDNA.";
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Thiol protease which recognizes and hydrolyzes the peptide
CC       bond at the C-terminal Gly of ufm-1, a ubiquitin-like modifier protein
CC       bound to a number of target proteins. {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the peptidase C78 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=ABA97481.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=BAF29604.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; DP000011; ABA97481.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP008218; BAF29604.2; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014968; BAT16745.1; -; Genomic_DNA.
DR   EMBL; AK243515; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015620793.1; XM_015765307.1.
DR   AlphaFoldDB; Q0INW1; -.
DR   SMR; Q0INW1; -.
DR   STRING; 4530.OS12T0285500-01; -.
DR   MEROPS; C78.A02; -.
DR   iPTMnet; Q0INW1; -.
DR   PaxDb; Q0INW1; -.
DR   PRIDE; Q0INW1; -.
DR   EnsemblPlants; Os12t0285500-01; Os12t0285500-01; Os12g0285500.
DR   GeneID; 4351994; -.
DR   Gramene; Os12t0285500-01; Os12t0285500-01; Os12g0285500.
DR   KEGG; osa:4351994; -.
DR   eggNOG; KOG2433; Eukaryota.
DR   HOGENOM; CLU_021066_2_1_1; -.
DR   InParanoid; Q0INW1; -.
DR   OMA; VSCSKFF; -.
DR   OrthoDB; 444004at2759; -.
DR   Proteomes; UP000000763; Chromosome 12.
DR   Proteomes; UP000059680; Chromosome 12.
DR   Genevisible; Q0INW1; OS.
DR   GO; GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR012462; Peptidase_C78_UfSP1/2.
DR   Pfam; PF07910; Peptidase_C78; 1.
DR   SUPFAM; SSF54001; SSF54001; 1.
PE   2: Evidence at transcript level;
KW   Hydrolase; Protease; Reference proteome; Thiol protease;
KW   Ubl conjugation pathway.
FT   CHAIN           1..640
FT                   /note="Probable Ufm1-specific protease"
FT                   /id="PRO_0000280375"
FT   ACT_SITE        467
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        591
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        593
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   640 AA;  70266 MW;  13650658A69F8581 CRC64;
     MEATAGGSRR RPTLLRLLCP KKSLVSPPTP SLRWLLGSPR FLPPLTVAAA LRSLPDGASS
     PDLQREAEEI RGLLVRGFDI VGAVHVGSAD AGGALELARA VRERLYGERA SHGMVGGCVE
     LGTGEIRFVV SEGDGVEAVE VTEVVWEDDP GRLLWEKGCL LRCELLLKLP LYVPSDDTSG
     IEARFYSLIE STASKLRDPH VSYLIEGPRT TPGESHYSII LHGNDLNSVP HLSRNGSTEE
     YDANIVSCSK FFPAKRSLSL TRENADAIQI TILSNQSFNS SKASTPAVEY FPAPALASLR
     AINLKLDILC YTSVDFPVAA AVSELVIPGL ADQLSIMKKA IVSELTTQQP QLSPYHFVPP
     GLLIPVTTIY DTRYGEIEEK QSELRRNLHL RLQLPLDRPL LRISNALNFS IGGTDKKASK
     SGSSLLRDVH REIPSSGVSG GIISLIDGSY EYYHYLHDGI DDNGWGCAYR SLQTIMSWYR
     LQQYSSINVP SHREIQQVLV EIGDKDPSFI GSREWIGAIE LSFVLDKLLG VSCKVINVRS
     GDELPEKCRE LAIHFETQGT PVMIGGGVLA YTLLGVDYNE SSGDCAFLIL DPHYTGADDL
     KKIVNGGWCG WKKSIDSKGR SFFLKDKFYN LLLPQRPNMV