ULAD_MYCPN
ID ULAD_MYCPN Reviewed; 218 AA.
AC P75293;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Probable 3-keto-L-gulonate-6-phosphate decarboxylase;
DE Short=KGPDC;
DE EC=4.1.1.85;
DE AltName: Full=3-dehydro-L-gulonate-6-phosphate decarboxylase;
DE AltName: Full=L-ascorbate utilization protein D;
GN Name=ulaD; Synonyms=sgaH; OrderedLocusNames=MPN_493; ORFNames=MP349;
OS Mycoplasma pneumoniae (strain ATCC 29342 / M129) (Mycoplasmoides
OS pneumoniae).
OC Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX NCBI_TaxID=272634;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29342 / M129;
RX PubMed=8948633; DOI=10.1093/nar/24.22.4420;
RA Himmelreich R., Hilbert H., Plagens H., Pirkl E., Li B.-C., Herrmann R.;
RT "Complete sequence analysis of the genome of the bacterium Mycoplasma
RT pneumoniae.";
RL Nucleic Acids Res. 24:4420-4449(1996).
RN [2]
RP DISCUSSION OF SEQUENCE.
RX PubMed=9274005; DOI=10.1099/00221287-143-8-2519;
RA Reizer J., Reizer A., Saier M.H. Jr.;
RT "Is the ribulose monophosphate pathway widely distributed in bacteria?";
RL Microbiology 143:2519-2520(1997).
CC -!- FUNCTION: Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into
CC L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization
CC (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=3-dehydro-L-gulonate 6-phosphate + H(+) = CO2 + L-xylulose 5-
CC phosphate; Xref=Rhea:RHEA:14353, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:57829, ChEBI:CHEBI:58774; EC=4.1.1.85;
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Note=Binds 1 Mg(2+) ion per subunit. {ECO:0000250};
CC -!- PATHWAY: Cofactor degradation; L-ascorbate degradation; D-xylulose 5-
CC phosphate from L-ascorbate: step 2/4.
CC -!- SIMILARITY: Belongs to the HPS/KGPDC family. KGPDC subfamily.
CC {ECO:0000305}.
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DR EMBL; U00089; AAB95997.1; -; Genomic_DNA.
DR PIR; S73675; S73675.
DR RefSeq; NP_110181.1; NC_000912.1.
DR RefSeq; WP_010874849.1; NC_000912.1.
DR AlphaFoldDB; P75293; -.
DR SMR; P75293; -.
DR IntAct; P75293; 1.
DR STRING; 272634.MPN_493; -.
DR PRIDE; P75293; -.
DR EnsemblBacteria; AAB95997; AAB95997; MPN_493.
DR KEGG; mpn:MPN_493; -.
DR PATRIC; fig|272634.6.peg.533; -.
DR HOGENOM; CLU_081825_0_0_14; -.
DR OMA; WEQAQEW; -.
DR BioCyc; MPNE272634:G1GJ3-810-MON; -.
DR UniPathway; UPA00263; UER00378.
DR Proteomes; UP000000808; Chromosome.
DR GO; GO:0033982; F:3-dehydro-L-gulonate-6-phosphate decarboxylase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004590; F:orotidine-5'-phosphate decarboxylase activity; IEA:InterPro.
DR GO; GO:0006207; P:'de novo' pyrimidine nucleobase biosynthetic process; IEA:InterPro.
DR GO; GO:0019854; P:L-ascorbic acid catabolic process; IEA:UniProtKB-UniPathway.
DR CDD; cd04726; KGPDC_HPS; 1.
DR Gene3D; 3.20.20.70; -; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR041710; HPS/KGPDC.
DR InterPro; IPR001754; OMPdeCOase_dom.
DR InterPro; IPR011060; RibuloseP-bd_barrel.
DR Pfam; PF00215; OMPdecase; 1.
DR SMART; SM00934; OMPdecase; 1.
DR SUPFAM; SSF51366; SSF51366; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Decarboxylase; Lyase; Magnesium; Metal-binding;
KW Reference proteome.
FT CHAIN 1..218
FT /note="Probable 3-keto-L-gulonate-6-phosphate
FT decarboxylase"
FT /id="PRO_0000212104"
FT BINDING 11
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 33
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 62
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 194
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT SITE 64
FT /note="Transition state stabilizer"
FT /evidence="ECO:0000250"
FT SITE 67
FT /note="Transition state stabilizer"
FT /evidence="ECO:0000250"
SQ SEQUENCE 218 AA; 24133 MW; 5285E03888F1CBA4 CRC64;
MALPLIQIAL DNLSLASALN DLAKVGDAVD VIEVGTILLT AEGVNAVKEI AKRYPHKLIV
ADGKIADTGK VFNQMFFDAG AHFTTVICAA ELPTVKDVVT VGNSYTPIKE TQVEMTSNFT
WEQVTQWKQV GVQQVVWHRS RDAQAAGVNW SDKDLQAVKR LADLGFKVTV TGGITLNDIQ
LFKDIPIYIF IAGRTIRDAS DPLQTVQQFK DEFHKYWK