UMP2_ARATH
ID UMP2_ARATH Reviewed; 113 AA.
AC Q9ZUX4; Q8LBD1;
DT 15-NOV-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 125.
DE RecName: Full=Uncharacterized protein At2g27730, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At2g27730; ORFNames=F15K20.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:AAC73027.1};
RN [1] {ECO:0000312|EMBL:AAC73027.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2] {ECO:0000305}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4] {ECO:0000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000305}
RP PROTEIN SEQUENCE OF 46-61, AND SUBCELLULAR LOCATION.
RC TISSUE=Leaf, and Stem;
RX PubMed=11743114; DOI=10.1104/pp.010474;
RA Kruft V., Eubel H., Jaensch L., Werhahn W., Braun H.-P.;
RT "Proteomic approach to identify novel mitochondrial proteins in
RT Arabidopsis.";
RL Plant Physiol. 127:1694-1710(2001).
RN [6]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP ANALYSIS].
RC STRAIN=cv. Landsberg erecta;
RX PubMed=14671022; DOI=10.1105/tpc.016055;
RA Heazlewood J.L., Tonti-Filippini J.S., Gout A.M., Day D.A., Whelan J.,
RA Millar A.H.;
RT "Experimental analysis of the Arabidopsis mitochondrial proteome highlights
RT signaling and regulatory components, provides assessment of targeting
RT prediction programs, and indicates plant-specific mitochondrial proteins.";
RL Plant Cell 16:241-256(2004).
RN [7]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND CLEAVAGE OF TRANSIT PEPTIDE AFTER
RP PHE-14.
RX PubMed=25732537; DOI=10.1093/jxb/erv064;
RA Carrie C., Venne A.S., Zahedi R.P., Soll J.;
RT "Identification of cleavage sites and substrate proteins for two
RT mitochondrial intermediate peptidases in Arabidopsis thaliana.";
RL J. Exp. Bot. 66:2691-2708(2015).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:11743114,
CC ECO:0000269|PubMed:14671022, ECO:0000305|PubMed:25732537}.
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DR EMBL; AC005824; AAC73027.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08036.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM62018.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM62019.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM62020.1; -; Genomic_DNA.
DR EMBL; AY059074; AAL15180.1; -; mRNA.
DR EMBL; AY035140; AAK59644.1; -; mRNA.
DR EMBL; AY087283; AAM64836.1; -; mRNA.
DR PIR; C84676; C84676.
DR RefSeq; NP_001324201.1; NM_001336124.1.
DR RefSeq; NP_001324202.1; NM_001336122.1.
DR RefSeq; NP_001324203.1; NM_001336123.1.
DR RefSeq; NP_565657.1; NM_128332.4.
DR PDB; 7A23; EM; 3.70 A; n=1-113.
DR PDB; 7A24; EM; 3.80 A; n=1-113.
DR PDB; 7AQQ; EM; 3.06 A; v=1-113.
DR PDB; 7AR7; EM; 3.72 A; v=74-103.
DR PDB; 7AR8; EM; 3.53 A; v=1-113.
DR PDB; 7ARB; EM; 3.41 A; v=1-113.
DR PDBsum; 7A23; -.
DR PDBsum; 7A24; -.
DR PDBsum; 7AQQ; -.
DR PDBsum; 7AR7; -.
DR PDBsum; 7AR8; -.
DR PDBsum; 7ARB; -.
DR AlphaFoldDB; Q9ZUX4; -.
DR SMR; Q9ZUX4; -.
DR IntAct; Q9ZUX4; 3.
DR MINT; Q9ZUX4; -.
DR STRING; 3702.AT2G27730.1; -.
DR PaxDb; Q9ZUX4; -.
DR PRIDE; Q9ZUX4; -.
DR ProteomicsDB; 245313; -.
DR EnsemblPlants; AT2G27730.1; AT2G27730.1; AT2G27730.
DR EnsemblPlants; AT2G27730.2; AT2G27730.2; AT2G27730.
DR EnsemblPlants; AT2G27730.3; AT2G27730.3; AT2G27730.
DR EnsemblPlants; AT2G27730.4; AT2G27730.4; AT2G27730.
DR GeneID; 817319; -.
DR Gramene; AT2G27730.1; AT2G27730.1; AT2G27730.
DR Gramene; AT2G27730.2; AT2G27730.2; AT2G27730.
DR Gramene; AT2G27730.3; AT2G27730.3; AT2G27730.
DR Gramene; AT2G27730.4; AT2G27730.4; AT2G27730.
DR KEGG; ath:AT2G27730; -.
DR Araport; AT2G27730; -.
DR TAIR; locus:2042001; AT2G27730.
DR eggNOG; ENOG502S4G2; Eukaryota.
DR HOGENOM; CLU_126827_1_0_1; -.
DR InParanoid; Q9ZUX4; -.
DR OMA; GWYMISP; -.
DR OrthoDB; 1543285at2759; -.
DR PhylomeDB; Q9ZUX4; -.
DR BioCyc; ARA:AT2G27730-MON; -.
DR BioCyc; MetaCyc:AT2G27730-MON; -.
DR PRO; PR:Q9ZUX4; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9ZUX4; baseline and differential.
DR Genevisible; Q9ZUX4; AT.
DR GO; GO:0031966; C:mitochondrial membrane; IDA:TAIR.
DR GO; GO:0005747; C:mitochondrial respiratory chain complex I; IDA:TAIR.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0005730; C:nucleolus; HDA:TAIR.
DR GO; GO:0005777; C:peroxisome; HDA:TAIR.
DR GO; GO:0000325; C:plant-type vacuole; HDA:TAIR.
DR GO; GO:0045271; C:respiratory chain complex I; IDA:TAIR.
DR GO; GO:0005507; F:copper ion binding; HDA:TAIR.
DR GO; GO:0009853; P:photorespiration; TAS:TAIR.
DR InterPro; IPR045284; At2g27730-like.
DR PANTHER; PTHR33878; PTHR33878; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Mitochondrion; Reference proteome;
KW Transit peptide.
FT TRANSIT 1..14
FT /note="Mitochondrion"
FT /evidence="ECO:0000269|PubMed:25732537"
FT CHAIN 15..113
FT /note="Uncharacterized protein At2g27730, mitochondrial"
FT /id="PRO_0000220587"
FT REGION 41..79
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 19
FT /note="V -> I (in Ref. 4; AAM64836)"
FT /evidence="ECO:0000305"
FT HELIX 80..102
FT /evidence="ECO:0007829|PDB:7AQQ"
SQ SEQUENCE 113 AA; 11948 MW; 8C4CCC968F8D620B CRC64;
MATRNALRIV SRRFSSGKVL SEEERAAENV FIKKMEQEKL QKLARQGPGE QAAGSASEAK
VAGATASASA ESGPKVSEDK NRNYAVVAGV VAIVGSIGWY LKAGGKKQPE VQE
