UPK1B_RAT
ID UPK1B_RAT Reviewed; 260 AA.
AC Q566D0;
DT 10-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 25-MAY-2022, entry version 98.
DE RecName: Full=Uroplakin-1b;
DE Short=UP1b;
DE AltName: Full=Uroplakin Ib;
DE Short=UPIb;
GN Name=Upk1b;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Component of the asymmetric unit membrane (AUM); a highly
CC specialized biomembrane elaborated by terminally differentiated
CC urothelial cells. May play an important role in normal bladder
CC epithelial physiology, possibly in regulating membrane permeability of
CC superficial umbrella cells or in stabilizing the apical membrane
CC through AUM/cytoskeletal interactions (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer with uroplakin-3A (UPK3A) or uroplakin-3B (UPK3B).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein.
CC -!- PTM: N-glycosylated with high-mannose oligosaccharides. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the tetraspanin (TM4SF) family. {ECO:0000305}.
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DR EMBL; BC093613; AAH93613.1; -; mRNA.
DR RefSeq; NP_001019424.1; NM_001024253.1.
DR RefSeq; XP_006248430.1; XM_006248368.3.
DR AlphaFoldDB; Q566D0; -.
DR SMR; Q566D0; -.
DR STRING; 10116.ENSRNOP00000004315; -.
DR PaxDb; Q566D0; -.
DR PRIDE; Q566D0; -.
DR GeneID; 303924; -.
DR KEGG; rno:303924; -.
DR CTD; 7348; -.
DR RGD; 1307806; Upk1b.
DR eggNOG; KOG3882; Eukaryota.
DR HOGENOM; CLU_088971_1_0_1; -.
DR InParanoid; Q566D0; -.
DR PhylomeDB; Q566D0; -.
DR TreeFam; TF335659; -.
DR PRO; PR:Q566D0; -.
DR Proteomes; UP000002494; Unplaced.
DR Genevisible; Q566D0; RN.
DR GO; GO:0016324; C:apical plasma membrane; ISO:RGD.
DR GO; GO:0120001; C:apical plasma membrane urothelial plaque; ISO:RGD.
DR GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
DR GO; GO:0030855; P:epithelial cell differentiation; ISO:RGD.
DR GO; GO:0009617; P:response to bacterium; ISO:RGD.
DR Gene3D; 1.10.1450.10; -; 1.
DR InterPro; IPR018499; Tetraspanin/Peripherin.
DR InterPro; IPR008952; Tetraspanin_EC2_sf.
DR InterPro; IPR034766; Uroplakin-1b.
DR PANTHER; PTHR19282; PTHR19282; 1.
DR PANTHER; PTHR19282:SF24; PTHR19282:SF24; 1.
DR Pfam; PF00335; Tetraspanin; 1.
DR SUPFAM; SSF48652; SSF48652; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..260
FT /note="Uroplakin-1b"
FT /id="PRO_0000219292"
FT TOPO_DOM 1..15
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 16..36
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 37..59
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 60..80
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 81..86
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 87..107
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 108..229
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 230..250
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 251..260
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 260 AA; 29813 MW; 97FAB4CE28937EBE CRC64;
MAKDDSTVRC FQGLLIFGHV IVGMCGIALT AECIFFVSDQ HSLYPLLEAT NNDDIFGAAW
IGMFVGICLF CLSVLAIVGI MKSNRKILLA YFIMMFIVYG FEVASCITAA TQRDFFTTNL
FLKQMLMRYQ NNSPPTNDDK WKNSYVTKTW DRLMLQDHCC GVNGPSDWQK YTSAFRVENS
DADYPWPRQC CVMDKLQEPL NLDACKLGVP GYYHSQGCYE LISGPMDRHA WGVAWFGFAI
LCWTFWVLLG TMFYWSRIEY