URE1_HELMU
ID URE1_HELMU Reviewed; 308 AA.
AC P50045;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=Urease subunit beta;
DE EC=3.5.1.5;
DE AltName: Full=Urea amidohydrolase subunit beta;
DE Flags: Fragment;
GN Name=ureB;
OS Helicobacter mustelae.
OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC Helicobacteraceae; Helicobacter.
OX NCBI_TaxID=217;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=NCTC 12032;
RX PubMed=7642313; DOI=10.1128/iai.63.9.3718-3721.1995;
RA Solnick J.V., Josenhans C., Tompkins L.S., Labigne A.;
RT "Construction and characterization of an isogenic urease-negative mutant of
RT Helicobacter mustelae.";
RL Infect. Immun. 63:3718-3721(1995).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 H(+) + H2O + urea = CO2 + 2 NH4(+); Xref=Rhea:RHEA:20557,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:16199,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:28938; EC=3.5.1.5;
CC Evidence={ECO:0000255|PROSITE-ProRule:PRU00700};
CC -!- COFACTOR:
CC Name=Ni cation; Xref=ChEBI:CHEBI:25516; Evidence={ECO:0000250};
CC Note=Binds 2 nickel ions per subunit. {ECO:0000250};
CC -!- PATHWAY: Nitrogen metabolism; urea degradation; CO(2) and NH(3) from
CC urea (urease route): step 1/1.
CC -!- SUBUNIT: Heterohexamer of 3 UreA (alpha) and 3 UreB (beta) subunits.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|PROSITE-ProRule:PRU00700}.
CC -!- PTM: Carboxylation allows a single lysine to coordinate two nickel
CC ions. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the metallo-dependent hydrolases superfamily.
CC Urease alpha subunit family.
CC -!- CAUTION: The orthologous protein is known as the alpha subunit (UreC)
CC in most other bacteria. {ECO:0000305}.
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DR EMBL; L33462; AAC41484.1; -; Genomic_DNA.
DR AlphaFoldDB; P50045; -.
DR SMR; P50045; -.
DR MEROPS; M38.982; -.
DR UniPathway; UPA00258; UER00370.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016151; F:nickel cation binding; IEA:InterPro.
DR GO; GO:0009039; F:urease activity; IEA:UniProtKB-EC.
DR GO; GO:0043419; P:urea catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.30.40.10; -; 1.
DR InterPro; IPR006680; Amidohydro-rel.
DR InterPro; IPR011059; Metal-dep_hydrolase_composite.
DR InterPro; IPR032466; Metal_Hydrolase.
DR InterPro; IPR011612; Urease_alpha_N_dom.
DR InterPro; IPR017951; Urease_asu_c.
DR InterPro; IPR029754; Urease_Ni-bd.
DR Pfam; PF01979; Amidohydro_1; 1.
DR Pfam; PF00449; Urease_alpha; 1.
DR SUPFAM; SSF51338; SSF51338; 1.
DR SUPFAM; SSF51556; SSF51556; 1.
DR PROSITE; PS01120; UREASE_1; 1.
DR PROSITE; PS51368; UREASE_3; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Metal-binding; Nickel.
FT CHAIN 1..>308
FT /note="Urease subunit beta"
FT /id="PRO_0000067532"
FT DOMAIN 131..>308
FT /note="Urease"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00700"
FT BINDING 136
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00700"
FT BINDING 138
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /ligand_label="2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00700"
FT BINDING 219
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /ligand_label="1"
FT /note="via carbamate group"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00700"
FT BINDING 219
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /ligand_label="2"
FT /note="via carbamate group"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00700"
FT BINDING 248
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00700"
FT BINDING 274
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /ligand_label="1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00700"
FT MOD_RES 219
FT /note="N6-carboxylysine"
FT /evidence="ECO:0000250"
FT NON_TER 308
SQ SEQUENCE 308 AA; 32118 MW; 1F11F29A5B3C84B1 CRC64;
MIKISRKEYV SMYGPTTGDK VRLGDTELIA EIEKDYTVYG EEIKFGGGKT IRDGMSQSVS
PDVNELDAVI TNAMIIDYTG IYKADIGIKD GKIAGIGKAG NRDTQDGVGM DLVVGASTEA
IAGEGLIVTA GGIDTHIHFI SPTQIPTALY SGVTTMIGGG TGPAAGTFAT TISPGEWNIK
QMIRAAEEYT MNLGFFGKGN TSNVKALEDQ IKAGALGFKV HEDCGSTPAV INHSLDIAEK
YDVQVAIHTD TLNEGGAVED TLAAIGGRTI HTFHTEGAGG GHAPDIIKAA GEANILPAST
NPTIPFTK