URED_ORYSJ
ID URED_ORYSJ Reviewed; 309 AA.
AC Q0E3I9;
DT 13-NOV-2013, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2013, sequence version 2.
DT 03-AUG-2022, entry version 61.
DE RecName: Full=Urease accessory protein D;
DE Short=AtURED;
GN Name=URED; OrderedLocusNames=Os02g0173000, LOC_Os02g07670;
GN ORFNames=OSJNBa0073A21;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: Required for the maturation and activation of urease via the
CC functional incorporation of the urease nickel metallocenter.
CC {ECO:0000250}.
CC -!- SUBUNIT: URED, UREF and UREG may form a complex that acts as a GTP-
CC hydrolysis-dependent molecular chaperone, activating the urease
CC apoprotein. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UreD family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF07949.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP005772; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP008208; BAF07949.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; Q0E3I9; -.
DR SMR; Q0E3I9; -.
DR STRING; 4530.OS02T0173000-01; -.
DR PaxDb; Q0E3I9; -.
DR PRIDE; Q0E3I9; -.
DR eggNOG; ENOG502RBJU; Eukaryota.
DR InParanoid; Q0E3I9; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR GO; GO:0016151; F:nickel cation binding; IEA:InterPro.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IEA:InterPro.
DR HAMAP; MF_01384; UreD; 1.
DR InterPro; IPR002669; UreD.
DR PANTHER; PTHR33643; PTHR33643; 1.
DR Pfam; PF01774; UreD; 1.
PE 3: Inferred from homology;
KW Chaperone; Nickel insertion; Reference proteome.
FT CHAIN 1..309
FT /note="Urease accessory protein D"
FT /id="PRO_0000424251"
SQ SEQUENCE 309 AA; 33568 MW; B4F63F5CC31BAD87 CRC64;
MEAEAAMEAE AAPAAATGAV RVEKVRGRSA VTRCFAKYPL KLIAPSKAGR ASSGAAWLYA
ITYGGGIVSG DIISCTVAVG DGCAAAMTTQ ASTKVYKAVD SKCSEQVLEA RVGEDALFAL
IPDPVTCFSM ARYHQKQVFH VFPNSNLVVV DWFTSGRYES GEKWNFSFYK SINHILLEDQ
PLFIDSVLLE QSSNFSIADR MQEYNVVAMV ILLGPKLKHI QDQMQDEVKK MMSVQLRPPT
SAGGRYSTRS QPLHPQRPPI IASCSPFGRM GTGMVARITA VSTESVYSFL RHHLAALEPF
LGACPYPAS