USPL1_ARATH
ID USPL1_ARATH Reviewed; 280 AA.
AC Q9XI99;
DT 17-FEB-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=BURP domain protein USPL1 {ECO:0000303|PubMed:19639386};
DE AltName: Full=Unknown seed protein-like protein 1 {ECO:0000303|PubMed:19639386};
DE Short=AtUSPL1 {ECO:0000303|PubMed:19639386};
DE Flags: Precursor;
GN Name=USPL1 {ECO:0000303|PubMed:19639386};
GN OrderedLocusNames=At1g49320 {ECO:0000312|Araport:AT1G49320};
GN ORFNames=F13F21.25 {ECO:0000312|EMBL:AAD43166.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP DOMAIN.
RX PubMed=9790599; DOI=10.1007/s004380050832;
RA Hattori J., Boutilier K.A., van Lookeren Campagne M.M., Miki B.L.;
RT "A conserved BURP domain defines a novel group of plant proteins with
RT unusual primary structures.";
RL Mol. Gen. Genet. 259:424-428(1998).
RN [6]
RP GENE FAMILY, NOMENCLATURE, FUNCTION, DEVELOPMENTAL STAGE, SUBCELLULAR
RP LOCATION, AND DISRUPTION PHENOTYPE.
RX PubMed=19639386; DOI=10.1007/s11103-009-9526-6;
RA Van Son L., Tiedemann J., Rutten T., Hillmer S., Hinz G., Zank T.,
RA Manteuffel R., Baeumlein H.;
RT "The BURP domain protein AtUSPL1 of Arabidopsis thaliana is destined to the
RT protein storage vacuoles and overexpression of the cognate gene distorts
RT seed development.";
RL Plant Mol. Biol. 71:319-329(2009).
RN [7]
RP TISSUE SPECIFICITY.
RX PubMed=19714473; DOI=10.1007/s11103-009-9541-7;
RA Teerawanichpan P., Xia Q., Caldwell S.J., Datla R., Selvaraj G.;
RT "Protein storage vacuoles of Brassica napus zygotic embryos accumulate a
RT BURP domain protein and perturbation of its production distorts the PSV.";
RL Plant Mol. Biol. 71:331-343(2009).
RN [8]
RP TISSUE SPECIFICITY, INDUCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Columbia;
RX PubMed=25333723; DOI=10.1371/journal.pone.0110065;
RA Harshavardhan V.T., Van Son L., Seiler C., Junker A., Weigelt-Fischer K.,
RA Klukas C., Altmann T., Sreenivasulu N., Baeumlein H., Kuhlmann M.;
RT "AtRD22 and AtUSPL1, members of the plant-specific BURP domain family
RT involved in Arabidopsis thaliana drought tolerance.";
RL PLoS ONE 9:E110065-E110065(2014).
RN [9]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=26106400; DOI=10.3389/fpls.2015.00412;
RA Park J., Cui Y., Kang B.H.;
RT "AtPGL3 is an Arabidopsis BURP domain protein that is localized to the cell
RT wall and promotes cell enlargement.";
RL Front. Plant Sci. 6:412-412(2015).
CC -!- FUNCTION: Associated with the protein storage vacuole formation.
CC {ECO:0000269|PubMed:19639386}.
CC -!- SUBCELLULAR LOCATION: Protein storage vacuole
CC {ECO:0000269|PubMed:19639386}. Golgi apparatus, Golgi stack
CC {ECO:0000269|PubMed:19639386}. Golgi apparatus, trans-Golgi network
CC {ECO:0000269|PubMed:19639386}. Prevacuolar compartment
CC {ECO:0000269|PubMed:19639386}.
CC -!- TISSUE SPECIFICITY: Expressed in cotyledons, radicle, floral buds, open
CC flowers, roots and developing seeds, but not in leaves
CC (PubMed:19714473). Highly expressed in the root tips. Detected in young
CC leaves, hypocotyls, stems and mature seed funiculum (PubMed:25333723).
CC {ECO:0000269|PubMed:19714473, ECO:0000269|PubMed:25333723}.
CC -!- DEVELOPMENTAL STAGE: Expressed in embryos at the cotyledon stage.
CC {ECO:0000269|PubMed:19639386}.
CC -!- INDUCTION: Up-regulated in the root by dehydration, salt stress,
CC osmotic stress, high temperature and abscisic acid.
CC {ECO:0000269|PubMed:25333723}.
CC -!- DOMAIN: The BURP domain located at the C-terminus has not been
CC identified in non-plant proteins. {ECO:0000269|PubMed:9790599}.
CC -!- DISRUPTION PHENOTYPE: No visible effect on seed development, but
CC significant reduction of 11S seed storage protein content in the mature
CC seeds (PubMed:19639386). Enhanced drought tolerance (PubMed:25333723).
CC {ECO:0000269|PubMed:19639386, ECO:0000269|PubMed:25333723}.
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DR EMBL; AC007504; AAD43166.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE32417.1; -; Genomic_DNA.
DR EMBL; BT006428; AAP21236.1; -; mRNA.
DR EMBL; AK227709; BAE99695.1; -; mRNA.
DR PIR; D96529; D96529.
DR RefSeq; NP_175357.1; NM_103822.3.
DR AlphaFoldDB; Q9XI99; -.
DR STRING; 3702.AT1G49320.1; -.
DR PaxDb; Q9XI99; -.
DR PRIDE; Q9XI99; -.
DR ProteomicsDB; 228605; -.
DR EnsemblPlants; AT1G49320.1; AT1G49320.1; AT1G49320.
DR GeneID; 841355; -.
DR Gramene; AT1G49320.1; AT1G49320.1; AT1G49320.
DR KEGG; ath:AT1G49320; -.
DR Araport; AT1G49320; -.
DR TAIR; locus:2010237; AT1G49320.
DR eggNOG; ENOG502QU5J; Eukaryota.
DR HOGENOM; CLU_011822_0_0_1; -.
DR InParanoid; Q9XI99; -.
DR OMA; MQKGENK; -.
DR OrthoDB; 1060418at2759; -.
DR PhylomeDB; Q9XI99; -.
DR PRO; PR:Q9XI99; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9XI99; baseline and differential.
DR GO; GO:0005795; C:Golgi stack; IEA:UniProtKB-SubCell.
DR GO; GO:0000326; C:protein storage vacuole; IDA:TAIR.
DR GO; GO:0048316; P:seed development; IMP:TAIR.
DR InterPro; IPR044816; BURP.
DR InterPro; IPR004873; BURP_dom.
DR PANTHER; PTHR31236; PTHR31236; 1.
DR Pfam; PF03181; BURP; 1.
DR SMART; SM01045; BURP; 1.
DR PROSITE; PS51277; BURP; 1.
PE 2: Evidence at transcript level;
KW Golgi apparatus; Reference proteome; Signal; Vacuole.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..280
FT /note="BURP domain protein USPL1"
FT /evidence="ECO:0000255"
FT /id="PRO_5005944492"
FT DOMAIN 58..280
FT /note="BURP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00604"
SQ SEQUENCE 280 AA; 31811 MW; 04EC3EA19608D29C CRC64;
MASTFRLSIS FLTLILFSLW VVEAHTSRKL ISIKEKEGQD ISHLLKDGEF DDPSLYMYFT
LNDLKLGTKL LIYFYKNDLQ KLPPLLTRQQ ADLIPFTKSK LDFLLDHFSI TKDSPQGKAI
KETLGHCDAK AIEGEHKFCG TSLESLIDLV KKTMGYNVDL KVMTTKVMVP AQNSISYALH
NYTFVEAPKE LVGIKMLGCH RMPYPYAVYY CHGHKGGSRV FEVNLVTDDG RQRVVGPAVC
HMDTSTWDAD HVAFKVLKME PRSAPVCHFF PLDNIVWVTK
