USP_VICFA
ID USP_VICFA Reviewed; 268 AA.
AC Q43675;
DT 17-FEB-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 25-MAY-2022, entry version 57.
DE RecName: Full=Unknown seed protein USP {ECO:0000303|PubMed:2017140};
DE Short=VfUSP {ECO:0000303|PubMed:2017140};
DE Flags: Precursor;
GN Name=USP {ECO:0000303|PubMed:2017140};
OS Vicia faba (Broad bean) (Faba vulgaris).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Fabeae; Vicia.
OX NCBI_TaxID=3906 {ECO:0000312|EMBL:CAA39696.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], TISSUE SPECIFICITY, AND GENE FAMILY.
RC STRAIN=cv. Fribo; TISSUE=Leaf;
RX PubMed=2017140; DOI=10.1007/bf00261688;
RA Baumlein H., Boerjan W., Nagy I., Bassuner R., Van Montagu M., Inze D.,
RA Wobus U.;
RT "A novel seed protein gene from Vicia faba is developmentally regulated in
RT transgenic tobacco and Arabidopsis plants.";
RL Mol. Gen. Genet. 225:459-467(1991).
RN [2]
RP GENE FAMILY.
RX PubMed=24272345; AGRICOLA=IND92000056; DOI=10.1007/BF00027389;
RA Bassuener R., Baeumlein H., Huth A., Jung R., Wobus U., Rapoport T.A.,
RA Saalbach G., Muentz K.;
RT "Abundant embryonic mRNA in field bean (Vicia faba L.) codes for a new
RT class of seed proteins: cDNA cloning and characterization of the primary
RT translation product.";
RL Plant Mol. Biol. 11:321-334(1988).
RN [3]
RP DOMAIN.
RX PubMed=9790599; DOI=10.1007/s004380050832;
RA Hattori J., Boutilier K.A., van Lookeren Campagne M.M., Miki B.L.;
RT "A conserved BURP domain defines a novel group of plant proteins with
RT unusual primary structures.";
RL Mol. Gen. Genet. 259:424-428(1998).
RN [4]
RP FUNCTION, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
RX PubMed=19639386; DOI=10.1007/s11103-009-9526-6;
RA Van Son L., Tiedemann J., Rutten T., Hillmer S., Hinz G., Zank T.,
RA Manteuffel R., Baeumlein H.;
RT "The BURP domain protein AtUSPL1 of Arabidopsis thaliana is destined to the
RT protein storage vacuoles and overexpression of the cognate gene distorts
RT seed development.";
RL Plant Mol. Biol. 71:319-329(2009).
CC -!- FUNCTION: Associated with the protein storage vacuole formation.
CC {ECO:0000269|PubMed:19639386}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus, Golgi stack
CC {ECO:0000269|PubMed:19639386}. Prevacuolar compartment
CC {ECO:0000269|PubMed:19639386}.
CC -!- TISSUE SPECIFICITY: Expressed in seeds (PubMed:2017140,
CC PubMed:19639386). Detected only in the embryo (PubMed:2017140). In
CC germinating seedlings, detected in roots, root caps, root hairs,
CC vascular bundle, mesophyll cells and epidermal cells of the cotyledons
CC and the hypocotyl (PubMed:2017140). {ECO:0000269|PubMed:19639386,
CC ECO:0000269|PubMed:2017140}.
CC -!- DOMAIN: The BURP domain located at the C-terminus has not been
CC identified in non-plant proteins. {ECO:0000269|PubMed:9790599}.
CC -!- MISCELLANEOUS: Most abundant mRNA species from cotyledons at early
CC stages of development, but the encoded protein does not accumulate in
CC cotyledons. {ECO:0000305|PubMed:2017140}.
CC -!- MISCELLANEOUS: The USP gene family consists of roughly 10 to 20
CC members. {ECO:0000269|PubMed:2017140}.
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DR EMBL; X56240; CAA39696.1; -; Genomic_DNA.
DR PIR; S14068; S14068.
DR AlphaFoldDB; Q43675; -.
DR GO; GO:0005795; C:Golgi stack; IEA:UniProtKB-SubCell.
DR InterPro; IPR044816; BURP.
DR InterPro; IPR004873; BURP_dom.
DR PANTHER; PTHR31236; PTHR31236; 2.
DR Pfam; PF03181; BURP; 1.
DR SMART; SM01045; BURP; 1.
DR PROSITE; PS51277; BURP; 1.
PE 2: Evidence at transcript level;
KW Golgi apparatus; Signal.
FT SIGNAL 1..25
FT /evidence="ECO:0000255"
FT CHAIN 26..268
FT /note="Unknown seed protein USP"
FT /id="PRO_5004231912"
FT DOMAIN 68..259
FT /note="BURP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00604"
SQ SEQUENCE 268 AA; 29766 MW; E0EF5479FA01D9F5 CRC64;
MEFAHLTVLS LFCLAFVGIT ATSSGEDYWQ SIWPNTPLPK TFSDLLIPSG ITNSLPIKSE
ELKQYSTLFF EHDLHPGKNF NLGHTNSVGS IIRPFTKSRQ GVTDSIWLAN KEKQSLEDFC
YSPTAIAEHK HCVSSLKSMI DQVISHFGST KIKAISSNFA PYQDQYVVED VKKVGDNAVM
CHRLNFEKVV FNCHQVRDTT AYVVSLVASD GTKTKALTVC HHDTRGMNPE LLYEALEVTP
GTVPVCHFIG NKAAAWVPNH TADNLCVM