UTP10_CANAL
ID UTP10_CANAL Reviewed; 1818 AA.
AC Q59ZX6; A0A1D8PFT6;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 1.
DT 25-MAY-2022, entry version 95.
DE RecName: Full=U3 small nucleolar RNA-associated protein 10;
GN Name=UTP10 {ECO:0000250|UniProtKB:P42945};
GN OrderedLocusNames=CAALFM_C114080WA; ORFNames=CaO19.7215;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Involved in nucleolar processing of pre-18S ribosomal RNA.
CC Involved in ribosome biosynthesis (By similarity).
CC {ECO:0000250|UniProtKB:P42945}.
CC -!- SUBUNIT: Component of the ribosomal small subunit (SSU) processome.
CC {ECO:0000250|UniProtKB:P42945}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250|UniProtKB:P42945,
CC ECO:0000255}. Membrane {ECO:0000255}; Single-pass membrane protein
CC {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the HEATR1/UTP10 family. {ECO:0000305}.
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DR EMBL; CP017623; AOW27008.1; -; Genomic_DNA.
DR RefSeq; XP_715016.1; XM_709923.1.
DR AlphaFoldDB; Q59ZX6; -.
DR SMR; Q59ZX6; -.
DR STRING; 237561.Q59ZX6; -.
DR GeneID; 3643345; -.
DR KEGG; cal:CAALFM_C114080WA; -.
DR CGD; CAL0000180258; orf19.7215.
DR VEuPathDB; FungiDB:C1_14080W_A; -.
DR eggNOG; KOG1837; Eukaryota.
DR HOGENOM; CLU_001128_3_1_1; -.
DR InParanoid; Q59ZX6; -.
DR OMA; YTNQLLF; -.
DR OrthoDB; 524830at2759; -.
DR Proteomes; UP000000559; Chromosome 1.
DR GO; GO:0030686; C:90S preribosome; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0030688; C:preribosome, small subunit precursor; IEA:EnsemblFungi.
DR GO; GO:0033553; C:rDNA heterochromatin; IEA:EnsemblFungi.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0034455; C:t-UTP complex; IBA:GO_Central.
DR GO; GO:0030515; F:snoRNA binding; IBA:GO_Central.
DR GO; GO:0034511; F:U3 snoRNA binding; IEA:EnsemblFungi.
DR GO; GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR GO; GO:0045943; P:positive regulation of transcription by RNA polymerase I; IBA:GO_Central.
DR Gene3D; 1.25.10.10; -; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012954; BP28_C_dom.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR022125; U3snoRNP10_N.
DR InterPro; IPR040191; UTP10.
DR PANTHER; PTHR13457; PTHR13457; 1.
DR Pfam; PF08146; BP28CT; 1.
DR Pfam; PF12397; U3snoRNP10; 1.
DR SMART; SM01036; BP28CT; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
PE 3: Inferred from homology;
KW Membrane; Nucleus; Reference proteome; Ribonucleoprotein;
KW Ribosome biogenesis; rRNA processing; Transmembrane; Transmembrane helix.
FT CHAIN 1..1818
FT /note="U3 small nucleolar RNA-associated protein 10"
FT /id="PRO_0000308498"
FT TRANSMEM 568..588
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REPEAT 1778..1816
FT /note="HEAT"
FT /evidence="ECO:0000255"
SQ SEQUENCE 1818 AA; 204337 MW; AFE1CCDB6EBAF902 CRC64;
MSSLASQLQS INEKTASVAL DRKQRSKLHS RSLIFDPKQA ATQDYEYIYE IATEGLEDLC
ELDSRFNKFK STLFSETSVN LDRNLQTKDV ISQLDKNIDA FLTLVGPYYG LTSSLKAVEW
LVRRFHANIH NAELMILTAL PYFQHPVFVK VLNVIPKQNL PQIFEWLVGY KDQLKTPPAS
SILKAFRNDF HFFNFYSKFL NDQIKNHTVY KEQLVFYLSN TVQLLASFSK NIEELNETHI
PVVLETTALM LLPQQKPKYS SSINSDLKLT SYSIISVLSS IFPFSADILK SLTVSILEDE
DALKGFTKPT LIVLSQLWKH FQGNLEVIEA FKNFKIGQHE LGVLDELKNE NYQLSTFIIL
VFISTFPSNE SYKLLPFIDL SNKTVFEIIT KLVLQNSTTQ EDSIRSNLTK IAQSLTKSDP
KLFQTTLESE NWKVDELELK LMSVLVESKN DEAEFDAGDE DNAVEDIEIV KTVDFTKLQS
TAKSYFNTEY DEEFNLVLKE LKSVLSASDA KLHVSVILTF LQKVFSTPEV ALTFAFRVAL
TPAVPLSIRL SAIKSIRIKI KNAANGKTDF YLLIPLILLA LFDNSKLIRS GFAQLLRLVI
EIKTKLTTGA ALFLEREIYG SVSDKKYPTP HDSLFLCSLL SEDNVKDTVL DPSRVINILF
DSIFKAKNGK SKPGKYFRSF IFTQWSLCSL PIVLKANAWK IVAQANKAGT DDRFFFLDGD
IENYFSKRNV WIDQASIAGI AFFDNAEVSV VGLVGGVASN DKNSNTESEW LCRALENPSG
NLQMTANNRV LETFDTFKPI ESRLKIVNKL VDILINDDIV EFDPMATLQE LNIDRNLFLQ
ALTSVQIGDQ IPEQGIAKRR RRSSNSTKQA MVRDEINNMA SGHLKKLTFL LEILESSLRK
KRNVAGPDLL KVLFKILTDL EYLGNDGNLP VLYAQETLAS CMLLNIVNLK SSSKEVKFDS
NSIRADLIVN SIRASPSPQV QNRLLLVISE LASLAPEVIL HSVMPIFTFM GAHTVRQDDE
FSSSALQQTV AKVIPALASN GLSPVNNEIE FLLASFATAF PHVPRHRRVK LFVSLTKTLG
CAESMHLILF LMGQQYANNV HKNKNGDSQS VVEFVHGYMK SFSAEEQLAG IVAFTKLWND
IPLNQLEPGS EEFEVLNNRP VFGTTIATLG QSGLAVLRND LLQFLDETLS SENKHELSSL
KTKMALVLID DEDSEVSKKE SVLDKFRAIT SFALASLDTF TNSHADIKLC STLYSLLGNL
LDLLPLNYFI DSIVASLDVD TLSDSLSIKV ARNYAILASR KFETELNVAH CDQVVIESVI
NNLLPILIKG IKKNVDVELQ QAYLDTFSTI VNKFGASGTE FASSDVSKVL IESLGIVTTD
RGLLNEQPEV IIASINAITS IVNILGVKTL GLFPKVVPPA LKIWESTNSL GDKESAKLLQ
GSVLVLLSCY IKKIPAFMST TLEAVLLTIL SSDLIDNHIR SSVLDLIVDH MDLAQVLKSL
CNVWLTKKFY TNDNSGNIGL FLKTLQATIN KMEKKQATTQ ATLFMRWLIS AFEFRQYSED
NDNKFDNNTI HRLESSFHGC AIAFVMKLND KSFRPLFANL VRWAVDGEGA TLKTNEVSRL
LAFFRFFNKL QDELKSIITS YFSYLLDPTS ALLKRFSEGS LVATNLRRII LIGLTSSFKY
DQDDYWSQQG RFDSICSPLL SQLSNIEDSI GKYLVKSVST FVTDVSSDEY NETLVHELIK
YISNANENSA ATKIWSIRTL KTIFQKMGEQ WLSYLPTLVP YIAELLEDDD EEVEMEVRRG
LVRVIENVLG EPLDRYLS