UTP10_CANGA
ID UTP10_CANGA Reviewed; 1770 AA.
AC Q6FT93;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=U3 small nucleolar RNA-associated protein 10;
GN Name=UTP10 {ECO:0000250|UniProtKB:P42945}; OrderedLocusNames=CAGL0G04411g;
OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL
OS Y-65) (Yeast) (Torulopsis glabrata).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Nakaseomyces;
OC Nakaseomyces/Candida clade.
OX NCBI_TaxID=284593;
RN [1] {ECO:0000312|EMBL:CAG59478.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Involved in nucleolar processing of pre-18S ribosomal RNA.
CC Involved in ribosome biosynthesis (By similarity).
CC {ECO:0000250|UniProtKB:P42945}.
CC -!- SUBUNIT: Component of the ribosomal small subunit (SSU) processome.
CC {ECO:0000250|UniProtKB:P42945}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250|UniProtKB:P42945,
CC ECO:0000255}. Membrane {ECO:0000255}; Multi-pass membrane protein
CC {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the HEATR1/UTP10 family. {ECO:0000305}.
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DR EMBL; CR380953; CAG59478.1; -; Genomic_DNA.
DR RefSeq; XP_446551.1; XM_446551.1.
DR AlphaFoldDB; Q6FT93; -.
DR SMR; Q6FT93; -.
DR STRING; 5478.XP_446551.1; -.
DR PRIDE; Q6FT93; -.
DR EnsemblFungi; CAG59478; CAG59478; CAGL0G04411g.
DR GeneID; 2888167; -.
DR KEGG; cgr:CAGL0G04411g; -.
DR CGD; CAL0137661; CAGL0G04411g.
DR VEuPathDB; FungiDB:CAGL0G04411g; -.
DR eggNOG; KOG1837; Eukaryota.
DR HOGENOM; CLU_001128_3_1_1; -.
DR InParanoid; Q6FT93; -.
DR Proteomes; UP000002428; Chromosome G.
DR GO; GO:0030686; C:90S preribosome; IEA:EnsemblFungi.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0030688; C:preribosome, small subunit precursor; IEA:EnsemblFungi.
DR GO; GO:0033553; C:rDNA heterochromatin; IEA:EnsemblFungi.
DR GO; GO:0032040; C:small-subunit processome; IEA:EnsemblFungi.
DR GO; GO:0034455; C:t-UTP complex; IEA:EnsemblFungi.
DR GO; GO:0034511; F:U3 snoRNA binding; IEA:EnsemblFungi.
DR GO; GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0045943; P:positive regulation of transcription by RNA polymerase I; IEA:EnsemblFungi.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012954; BP28_C_dom.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR022125; U3snoRNP10_N.
DR InterPro; IPR040191; UTP10.
DR PANTHER; PTHR13457; PTHR13457; 1.
DR Pfam; PF08146; BP28CT; 1.
DR Pfam; PF12397; U3snoRNP10; 1.
DR SMART; SM01036; BP28CT; 1.
DR SUPFAM; SSF48371; SSF48371; 2.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
PE 3: Inferred from homology;
KW Membrane; Nucleus; Reference proteome; Repeat; Ribonucleoprotein;
KW Ribosome biogenesis; rRNA processing; Transmembrane; Transmembrane helix.
FT CHAIN 1..1770
FT /note="U3 small nucleolar RNA-associated protein 10"
FT /id="PRO_0000308499"
FT TRANSMEM 499..519
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 528..548
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REPEAT 1730..1768
FT /note="HEAT"
FT /evidence="ECO:0000255"
SQ SEQUENCE 1770 AA; 200909 MW; CFD1FE78D8AB9241 CRC64;
MSSLSDQLAQ VAASNASVAF DRKKRQKLHS ASLIYNPKTA ATQDYETIFE NALGALQELC
DIEPRFQVFS KTLFSETSIT IDRNVQSKEE NKNLDNAINA YLLMVSSKWH LAPALHATEW
LVRRFQIHVH NTEILLLSTL NYYQSPIFKR ILNIVKLPAL FQPLSNFVKN DSNPTNITII
KMFNDTDFLK LYSNYLSKCI KHKSTYTNQL LFVTCCFINL IAFNSSNDEK LEFLVPIILE
IAAKLLASGS TDCQIAAHTI LIVFTAALPL KKDIVVAAIE TILANLKDKK AEQSAFWAVI
KISQTLKGQQ AIEHLPANIY KIFDKHYTWV RVLDLLTEEP SIKCDKFMTS YIRAMIRFDH
SKLDMVVPLV QKLSLEKYEF RSIVIDLIHL SEVLEDKSKL IDLFEFLVKE NESLVINCLS
SLNLTGEMFE IRLTTSLFSK TNDDNELELL KTLNSHKNTS SDKKEETKPF KQFLEENSEF
IVTSNKSMIS EDDEKFNKIL GLFIEAIGTG YQAGLFLSSF MTTLEARLTF LLRVIVSPSA
PIALRLLAMN NISKYIQSID KELNLFTLIP FLLVAQSGSS KNLKISVKKI LGQIGNRPFT
KHYFMSNQLY GEGKDIKVPS PSDSEMWTKN FIENYVVENV DISGVFIPKQ AEKVFLLFWA
QQVLDIPLPY PQYMILNFLG KYVPNTASYS GLFEESISSY LERREELLLR CALNKTDPIQ
FETAMVNLIS NKEKHHFMLD FIINVLQSDY EDLIQILVDR LVEVFATFKT SNQLRIVQEI
LQSVTKEDQI YDALGTLQSL QIDPDTFVCI FKENSINSES DVTSFPKRRR RRSSTNKAAL
QSAEVSQIAE DHLKKLTIML ETLDKQKVKG SEELLSSLFF TLADFETLDQ DGGLPVLYAE
ELLASAMLNT IRSLKDQGLT QLQNVRADII VSAIRTSSSP QVQNKLLLVI GELATLSSEI
VLHSVMPIFT FMGAHSVRQD DEFTTQVVEK TILTVVPAFL AANSENITEE IEFLVMSFAT
ALQHIPKHRR LRLFTTLVQA LGSDNSLGPL LLLISQQYSN AVKSFKISES RSLVEFTKLL
LSKFEVQEQI TGFRKFLELY EKLLLANKNP EKKVTLETQA LFSSKILNLT QSEFCDLTNN
SYDFLTKVIV DTNDDYYDSS RNFKIRLYSI ILDPTVSNAT RKALDESYSS VLKMILSLIA
DYPDIFVFET NENSEKQNSV HFIGDILEEI KQSLYGLLHA ILDVLPINVF LTTTVPLLES
SIDKEIRYHI ASNIFDKFEN ETVDDHELTQ SVVHTLNEKI PQEENNVAQV LLNLQSSLIN
KYGSFFDNNL LVEVLNLASG LISTGPRELQ ISSIAVITNC VSVMGVKFIS FYPKVVPICI
KLFNETRASK EELAPQLQLS ILLLFTALVK SIPSFLTSDL ISLMKLIFFS SGVEVTTRLS
VIQLVTEKLD LKNVLGTLLK VWNSEVKESG DSTAISLFLS LLEGTVEKIE KKSATSQSPL
FFKLLICLFE FRSQSEFDTN TISRIESSVY AVANTYVLKL NDKVFRPLFV ILIKWAFDGE
GVSSESITEK ERLTAFFKFF NRLQENLKGI ITSYFTYLIE PVNELLKRFI SGDISDVNLR
RLLLNSLTSS LKYDRDEYWQ STSRFELICP SLVNQLSNIE PTIGKYLVKA IGSLAAKNSS
VDEHNQMMNK LLVEHMKATC SSNEKLWAVR TVKLIYSKVG ESWLVLLPQM VPIIAELLED
DNEEVESEVR GGLVRVMENV LGEPFDRYLD