UTP10_COCIM
ID UTP10_COCIM Reviewed; 1813 AA.
AC Q1DHH9; I9NSK4;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2013, sequence version 2.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=U3 small nucleolar RNA-associated protein 10;
GN Name=UTP10 {ECO:0000250|UniProtKB:P42945}; ORFNames=CIMG_10234;
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=RS;
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
CC -!- FUNCTION: Involved in nucleolar processing of pre-18S ribosomal RNA.
CC Involved in ribosome biosynthesis (By similarity).
CC {ECO:0000250|UniProtKB:P42945}.
CC -!- SUBUNIT: Component of the ribosomal small subunit (SSU) processome.
CC {ECO:0000250|UniProtKB:P42945}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:P42945}.
CC -!- SIMILARITY: Belongs to the HEATR1/UTP10 family. {ECO:0000305}.
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DR EMBL; GG704915; EAS27629.3; -; Genomic_DNA.
DR RefSeq; XP_001239212.2; XM_001239211.2.
DR AlphaFoldDB; Q1DHH9; -.
DR SMR; Q1DHH9; -.
DR STRING; 246410.Q1DHH9; -.
DR EnsemblFungi; EAS27629; EAS27629; CIMG_10234.
DR GeneID; 4558029; -.
DR KEGG; cim:CIMG_10234; -.
DR VEuPathDB; FungiDB:CIMG_10234; -.
DR InParanoid; Q1DHH9; -.
DR OMA; NDVMWKQ; -.
DR OrthoDB; 524830at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 1.25.10.10; -; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012954; BP28_C_dom.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR022125; U3snoRNP10_N.
DR InterPro; IPR040191; UTP10.
DR PANTHER; PTHR13457; PTHR13457; 1.
DR Pfam; PF08146; BP28CT; 1.
DR Pfam; PF12397; U3snoRNP10; 1.
DR SMART; SM01036; BP28CT; 1.
DR SUPFAM; SSF48371; SSF48371; 2.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribonucleoprotein;
KW Ribosome biogenesis; rRNA processing.
FT CHAIN 1..1813
FT /note="U3 small nucleolar RNA-associated protein 10"
FT /id="PRO_0000308501"
FT REPEAT 245..283
FT /note="HEAT 1"
FT REPEAT 389..427
FT /note="HEAT 2"
FT REPEAT 428..464
FT /note="HEAT 3"
FT REPEAT 584..621
FT /note="HEAT 4"
FT REPEAT 659..695
FT /note="HEAT 5"
FT REPEAT 1058..1095
FT /note="HEAT 6"
FT REPEAT 1189..1228
FT /note="HEAT 7"
FT REPEAT 1265..1302
FT /note="HEAT 8"
FT REPEAT 1309..1347
FT /note="HEAT 9"
FT REPEAT 1398..1437
FT /note="HEAT 10"
FT REPEAT 1678..1715
FT /note="HEAT 11"
FT REPEAT 1769..1806
FT /note="HEAT 12"
FT REGION 686..705
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 887..912
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 690..705
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 895..912
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1813 AA; 201734 MW; EB47D8D057A67A7C CRC64;
MASSLAAQLA QIAATSTHQL DLKAQRAAHS QSLIFEKKIA GSQDFDTIFQ VCHEGFQELC
SLDSRFLSFR RNIFSDQSKT EDRGQMTTSQ NKELDSVLED FLSLVGARLL LTPAVKAVDW
LIRRFRVHEY NTSFLLLTFL PYHTTPLFLN FLSILPEDLT QTFKVFLPYK RSMTLPPRQV
IVQSASTNKS FFSALNNYVL QVSKSQAHYQ GLVSFWAGIT TEALANMLDS AKSGRMEIET
RNKEDVLIRI LPVLNDAFML RKAPQLVVGC YMLCVVLANK ASLEDHVLDN LMEAVTGSWT
QTNFVSGITC LSVLSQQKHE KSLPSKVVKA VLRLDNVIEV FEELSGRYAV TGLIIGLIRS
CVQENGKRSD PARIPFVGQL IQRAILSDSE TIEALTILLQ AFSDLQRQGL VADGMGKQLS
DLLLQFNESD TLAPLLRKAI ENAGVDITQL EMTLETVLQA DIMPMEIEDA DLLDFISSSQ
TQDAFAVALE PLSQAAITES SFLAPGSSLL FDQLAEAFIH GASTKDRVSR FIKLPVLRPD
KPLDDPLYLS FFIRFFSGPY PVTARTVAIS IVSSCITAMA DKSADMQGIL PYIISALADP
SERVRREAAA LLSLIDRLAS KCKDNDDSNA QIWGRGCLYG QNERSESVQF LPMKDIYKII
HHALMPALEE YVLDPDQVGR TLTQVIRGPR SQDDSDRTRS ESTGVEFKKP LRRDLFLFLC
SHASKTALYT VKLRLLKFLN KVGKIGSLNC TEALRQVFDQ WRLLSLEHLQ RIEDGERIST
NELEDQVLSI IYPKDMDAVD LLFSSLTSNS RSNRESFLTA GFNRLKEVWP SLEETHELSL
ANRLLQISLS LENGKLAGAA KGLLRSVDLS GPVILEFLNK ISASVPDLGS RGPPSKKRRT
SQNNMVPMSS MDKETDSVLQ KMTFILELID SSHSENHPEL ISGLFQTLTI IHHLKLQTRS
EMSYLLSLNL GILLSIVNKW KGMPTRKINT SSIRADLIID CVRTSESPQV QNTALLLVAG
LATVAPELVL HSVMPIFTFM GSSVLRKDDE YSALVIDQTI DQVVPPLVQS LRNQKRDVVS
GTSELLLSFT TAFEHIPSYR RLRLFEALIT KLGPEDFLFA VFAMFANRYS MDKDVLATMT
ALASDCNAEL QLITYARYLN LVKDTLQPKP TLAKTLLGVG SEDGRDPQKI AVDLLQALSH
LLKFTSLRTK MSECFDSGTE QQVDKAHGLF STILEQTLAL SESVRTVKPV NSACGETLGT
LLGTLSLVDF VDTIEVLLQR PSDDLRRKVI KLLENRLDSS NDRDKASQAR VLSFLTVLIN
ILETSPDILL KHAAVACIEK IGEKYGKKDP SQVLAAAKVI SGEHCLGQPD RRIRVMGLLC
LASMSEILGE GIIPTLPEAL PRAIDLLRDT LAASDDDSQL HDAVYSLISA LLIHVPWMIS
GEYLDNILQL SFISSNTDLA EGSDENRLEA LQLLAKRVDV KEAFAGVERN WDSAVTQGSR
AVQEALDVVR TAIEKHAKSA TVKNVSVLMK LLCKAFDLRR LQLSPLNDGG FDEAEVDEIE
SRANDVAVRM IYKLNDTVFR PLFIDLTAWA VSGLGKKDTT GRVARLTTFY RFLESFFGTL
KSIVTGYSSY IIESAVEVLK FSRCNDKATK TLWLAVLRML RNSFGHDQDE FWQSPTHLAS
ISEPLIKQLS MATNSPTLDL VAAEAIPTIV ELAVAADSPD NHKELNTVIM KFMRAGHGNA
RGADNPYTRL AAVKCEQQLT ERLGEEWLAL LPEMLPYISE LLEDDDENVE REVRRWVLSI
EDILGEKLDD MLT