UTP15_XENTR
ID UTP15_XENTR Reviewed; 515 AA.
AC Q5XGE2;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=U3 small nucleolar RNA-associated protein 15 homolog;
GN Name=utp15;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Ribosome biogenesis factor. Involved in nucleolar processing
CC of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA
CC transcription by RNA polymerase I. {ECO:0000250|UniProtKB:Q8TED0}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:Q8TED0}.
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DR EMBL; BC084500; AAH84500.1; -; mRNA.
DR RefSeq; NP_001011103.1; NM_001011103.1.
DR AlphaFoldDB; Q5XGE2; -.
DR SMR; Q5XGE2; -.
DR STRING; 8364.ENSXETP00000059937; -.
DR PaxDb; Q5XGE2; -.
DR DNASU; 496516; -.
DR GeneID; 496516; -.
DR KEGG; xtr:496516; -.
DR CTD; 84135; -.
DR Xenbase; XB-GENE-491403; utp15.
DR eggNOG; KOG0310; Eukaryota.
DR InParanoid; Q5XGE2; -.
DR OrthoDB; 621827at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0045943; P:positive regulation of transcription by RNA polymerase I; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 2.
DR InterPro; IPR018983; U3_snoRNA-assocProt_15_C.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF09384; UTP15_C; 1.
DR Pfam; PF00400; WD40; 4.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Repeat; rRNA processing; WD repeat.
FT CHAIN 1..515
FT /note="U3 small nucleolar RNA-associated protein 15
FT homolog"
FT /id="PRO_0000051327"
FT REPEAT 36..75
FT /note="WD 1"
FT REPEAT 78..117
FT /note="WD 2"
FT REPEAT 120..159
FT /note="WD 3"
FT REPEAT 162..202
FT /note="WD 4"
FT REPEAT 204..242
FT /note="WD 5"
FT REPEAT 246..285
FT /note="WD 6"
FT REPEAT 287..326
FT /note="WD 7"
SQ SEQUENCE 515 AA; 58267 MW; 55C157F75C804142 CRC64;
MSGYKPVAIP TYPKLGEKIT QDTLYWKRYK TPVQIKEFGA VTKIHFSPVQ PCTYAVTSST
RIHLYGQYSQ EPIKTFSRFK DTAYCGTFRG DGKLLAAGCE DSVVQLFDIS GKAALRQFSG
HSKAVHFVDF TADKYRIVSG SDDYTSRLWD IPNGVEITSY NEHTDYIRCG CTSALNNDLF
ATGSYDHTIK IFDGRTDKSV MSMDHGQPVE SVLLFPSGGL LVSAGGRYVK VWDILKGGQL
LVSLRNHHKT VTSLCLSSSG QRLLSASLDR HVKVYSTMNY KVVHSFDYAA SILSLALAPD
DQMIVVGMTN GVLNIKHRKP EERKQLQSTT KRHPRYRVFV RGKDYMPKQD DIFISKPVIA
HLKKYDKLLK GFHMTEALDT VLQPQIRNQR PEVTVAVMNE LKRRGTLKNA LAGRNEKQLS
DLLIFLLKHL VNPQFVPILL NVAEHIIDIY SPVVGQSSVI YKQFIRLQEV LEKEINYQEE
LLKMLGMMDT LFATMTTKKE SPWEEPKPIL PLSSQ