UTP21_SCHPO
ID UTP21_SCHPO Reviewed; 902 AA.
AC O14053;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 25-MAY-2022, entry version 146.
DE RecName: Full=U3 small nucleolar RNA-associated protein 21 homolog;
DE Short=U3 snoRNA-associated protein 21;
GN ORFNames=SPCC1672.07;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
CC -!- FUNCTION: Involved in nucleolar processing of pre-18S ribosomal RNA and
CC ribosome assembly. {ECO:0000250}.
CC -!- SUBUNIT: Interacts with snoRNA U3. Interacts with MPP10. Component of
CC the ribosomal small subunit (SSU) processome composed of at least 40
CC protein subunits and snoRNA U3 (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- DOMAIN: The WD repeats are grouped into two tandem seven-bladed beta-
CC propeller regions. {ECO:0000250}.
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DR EMBL; CU329672; CAA20445.1; -; Genomic_DNA.
DR PIR; T41051; T41051.
DR RefSeq; NP_587878.1; NM_001022870.2.
DR AlphaFoldDB; O14053; -.
DR SMR; O14053; -.
DR BioGRID; 275867; 11.
DR IntAct; O14053; 1.
DR STRING; 4896.SPCC1672.07.1; -.
DR iPTMnet; O14053; -.
DR MaxQB; O14053; -.
DR PaxDb; O14053; -.
DR EnsemblFungi; SPCC1672.07.1; SPCC1672.07.1:pep; SPCC1672.07.
DR GeneID; 2539299; -.
DR KEGG; spo:SPCC1672.07; -.
DR PomBase; SPCC1672.07; -.
DR VEuPathDB; FungiDB:SPCC1672.07; -.
DR eggNOG; KOG1539; Eukaryota.
DR HOGENOM; CLU_002774_2_0_1; -.
DR InParanoid; O14053; -.
DR OMA; KFVGHTA; -.
DR PhylomeDB; O14053; -.
DR Reactome; R-SPO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:O14053; -.
DR Proteomes; UP000002485; Chromosome III.
DR GO; GO:0032153; C:cell division site; HDA:PomBase.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0072686; C:mitotic spindle; HDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; ISO:PomBase.
DR GO; GO:0006364; P:rRNA processing; ISO:PomBase.
DR Gene3D; 2.130.10.10; -; 2.
DR InterPro; IPR007319; SSU_processome_Utp21.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF04192; Utp21; 1.
DR Pfam; PF00400; WD40; 1.
DR SMART; SM00320; WD40; 11.
DR SUPFAM; SSF50978; SSF50978; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribonucleoprotein;
KW Ribosome biogenesis; WD repeat.
FT CHAIN 1..902
FT /note="U3 small nucleolar RNA-associated protein 21
FT homolog"
FT /id="PRO_0000051496"
FT REPEAT 40..71
FT /note="WD 1"
FT REPEAT 80..110
FT /note="WD 2"
FT REPEAT 119..154
FT /note="WD 3"
FT REPEAT 164..198
FT /note="WD 4"
FT REPEAT 206..243
FT /note="WD 5"
FT REPEAT 249..284
FT /note="WD 6"
FT REPEAT 289..332
FT /note="WD 7"
FT REPEAT 339..373
FT /note="WD 8"
FT REPEAT 399..438
FT /note="WD 9"
FT REPEAT 447..481
FT /note="WD 10"
FT REPEAT 492..528
FT /note="WD 11"
FT REPEAT 533..568
FT /note="WD 12"
FT REPEAT 570..611
FT /note="WD 13"
FT REPEAT 613..651
FT /note="WD 14"
SQ SEQUENCE 902 AA; 100570 MW; 5EEFFC6034BDC047 CRC64;
MPFAEKKRRT YENAVKPLRK SRIYAPFRSI GHVSNAVPFD IEARGTHFLV TTSVGNTFQT
YDCEKLNLLF VGKQLDKEIT CLKSFKDFML VAAGSKIFAY KRGKIIWDID VEQEHGTVTH
LDAFGEWIIA CTSSRHVYVW KHASKYSVPE LHTTFLPNTN ADITSLLHPS TYLNKILLGF
SDGALQIWNL RVSKRVHEFQ EFFGDGITSL TQAPVLDVLA VGTISGRIVI FNLKNGSILM
EFKQDGQVLS CSFRTDGTPI LASSNPIGDL SFWDLSKRRI QNVTYNAHFG SLPKIQFLNG
QPILVTAGPD NSLKEWIFDS MDGAPRILRS RNGHYEPPSF VKFYGKSVHF LISAATDRSL
RAVSLYQDSQ STELSQGSVI SKAKKLNVRP EELKLPEITA LSSSNTREKY WDNVLTAHKN
DSSARTWNWK SKTLGQHVLP TSDGTSVRSV CVSCCGNFGL IGSSKGVVDV YNMQSGIKRK
SFGQSSLSGK PVTAVMLDNV NRILVTASLD GILKFWDFNK GNLIDSLDVG SSITHAIYQH
SSDLVAVACD DFGIRIVDVQ TRKIVRELWG HSNRLTSFDF SDTGRWLVTA SLDGTIRTWD
LPTGHLIDSI STPSVCTSLT FAPTGDYLAT THVDQVGISL WTNLSMFKHV STKALRLDDV
VEVSAPSVSG EKGISVVEAA LNVESNAEDE EDISYRTMDQ LDPNLQTLSK LPRTQWQTLI
NLEAIKARNA PKEVPKVPEK APFFLPSLKD QSEATVPKQP IATEISKPTA VASIKVSGTE
FSTLLHGNDD DAFFEYLKSL GPAKIDLEIR SLDAYPPYEE FILFINIMTR RLSKRRDFEL
VQACMSVFTK SHEDVLLMHD TPEDTVPVFE SLKAWESVHK EENQRLLDLV GYCSGILSFM
RT