UTP6_SCHPO
ID UTP6_SCHPO Reviewed; 488 AA.
AC O60188;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=U3 small nucleolar RNA-associated protein 6;
DE Short=U3 snoRNA-associated protein 6;
GN Name=utp6; ORFNames=SPBC244.02c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
CC -!- FUNCTION: Component of the SSU processome, a pre-ribosomal particle
CC required for the maturation of the 18S rRNA from the 35S pre-rRNA
CC precursor. {ECO:0000250}.
CC -!- SUBUNIT: Component of the ribosomal small subunit (SSU) processome,
CC composed of the 35S pre-rRNA precursor, the U3 snoRNA, and at least 40
CC protein subunits. Interacts with U3 snoRNA. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UTP6 family. {ECO:0000305}.
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DR EMBL; CU329671; CAA19317.1; -; Genomic_DNA.
DR PIR; T39963; T39963.
DR RefSeq; NP_596813.1; NM_001023833.2.
DR AlphaFoldDB; O60188; -.
DR SMR; O60188; -.
DR BioGRID; 277176; 1.
DR STRING; 4896.SPBC244.02c.1; -.
DR iPTMnet; O60188; -.
DR MaxQB; O60188; -.
DR PaxDb; O60188; -.
DR PRIDE; O60188; -.
DR EnsemblFungi; SPBC244.02c.1; SPBC244.02c.1:pep; SPBC244.02c.
DR GeneID; 2540651; -.
DR KEGG; spo:SPBC244.02c; -.
DR PomBase; SPBC244.02c; utp6.
DR VEuPathDB; FungiDB:SPBC244.02c; -.
DR eggNOG; KOG2396; Eukaryota.
DR HOGENOM; CLU_026025_3_0_1; -.
DR InParanoid; O60188; -.
DR OMA; FLSYIQY; -.
DR PhylomeDB; O60188; -.
DR Reactome; R-SPO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:O60188; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0032153; C:cell division site; HDA:PomBase.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; ISO:PomBase.
DR GO; GO:0005732; C:sno(s)RNA-containing ribonucleoprotein complex; ISO:PomBase.
DR GO; GO:0030515; F:snoRNA binding; ISO:PomBase.
DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISO:PomBase.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR013949; Utp6.
DR PANTHER; PTHR23271; PTHR23271; 1.
DR Pfam; PF08640; U3_assoc_6; 1.
DR SMART; SM00386; HAT; 4.
DR SUPFAM; SSF48452; SSF48452; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribonucleoprotein;
KW Ribosome biogenesis; rRNA processing.
FT CHAIN 1..488
FT /note="U3 small nucleolar RNA-associated protein 6"
FT /id="PRO_0000374010"
FT REPEAT 31..63
FT /note="HAT 1"
FT REPEAT 87..119
FT /note="HAT 2"
FT REPEAT 121..153
FT /note="HAT 3"
FT REPEAT 156..188
FT /note="HAT 4"
SQ SEQUENCE 488 AA; 55645 MW; 2EBFCC1D4F3E55EC CRC64;
MAEKVQYYME QSVPELEDLL EKNIFNRDEI NNIIKTRRVF EEKLARRQVK LNDFLSYIQY
EINLETLRAK RHKRLNITGK ITISDYAGPR KVLFLFLRAT NKFFGDVTLW LDYIHYAQKI
KAVNIVGKIC VAALQKHPNN AELWVVACDH EFSINANVSA ARALMNRALR LNQENPVIWA
AYFRLELSYM TKLFARSQIL TGNISSKTEN ITNGVSEDTI GSLSSDTIQL PMVSMEEFLG
SSSSEVRKND SDLNISDDIG NISSKEQQTQ KFANVLLQII LNSRKNLSLQ NYVGFFVSVL
DALFECFDVP VVQYMYQENI IGICNEHFEH FKNESGEIYG VLLHRWCFLE IFIKLRGAYP
SNDSGISGKG IFGLKKNDPR ITSMVLTDPG FVDDLQAIVE KYQSISSDFQ IPFKTKKIFY
SFFVKTLHAI SSSSAAESSI ALALHMLVIN AFQSMEKLKI LTFDDSLQEI YKEAQIQSGT
FMSNATLS