UVRC_ALISL
ID UVRC_ALISL Reviewed; 608 AA.
AC B6EI86;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 25-MAY-2022, entry version 71.
DE RecName: Full=UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203};
DE Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};
DE AltName: Full=Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203};
GN Name=uvrC {ECO:0000255|HAMAP-Rule:MF_00203}; OrderedLocusNames=VSAL_I2140;
OS Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain
OS LFI1238)).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Aliivibrio.
OX NCBI_TaxID=316275;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LFI1238;
RX PubMed=19099551; DOI=10.1186/1471-2164-9-616;
RA Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N.,
RA Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S.,
RA Thurston S., Parkhill J., Willassen N.P., Thomson N.R.;
RT "The genome sequence of the fish pathogen Aliivibrio salmonicida strain
RT LFI1238 shows extensive evidence of gene decay.";
RL BMC Genomics 9:616-616(2008).
CC -!- FUNCTION: The UvrABC repair system catalyzes the recognition and
CC processing of DNA lesions. UvrC both incises the 5' and 3' sides of the
CC lesion. The N-terminal half is responsible for the 3' incision and the
CC C-terminal half is responsible for the 5' incision. {ECO:0000255|HAMAP-
CC Rule:MF_00203}.
CC -!- SUBUNIT: Interacts with UvrB in an incision complex.
CC {ECO:0000255|HAMAP-Rule:MF_00203}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00203}.
CC -!- SIMILARITY: Belongs to the UvrC family. {ECO:0000255|HAMAP-
CC Rule:MF_00203}.
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DR EMBL; FM178379; CAQ79825.1; -; Genomic_DNA.
DR RefSeq; WP_012550666.1; NC_011312.1.
DR AlphaFoldDB; B6EI86; -.
DR SMR; B6EI86; -.
DR STRING; 316275.VSAL_I2140; -.
DR EnsemblBacteria; CAQ79825; CAQ79825; VSAL_I2140.
DR KEGG; vsa:VSAL_I2140; -.
DR eggNOG; COG0322; Bacteria.
DR HOGENOM; CLU_014841_3_2_6; -.
DR OMA; HIECFDN; -.
DR Proteomes; UP000001730; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0009381; F:excinuclease ABC activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:UniProtKB-UniRule.
DR GO; GO:0009432; P:SOS response; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.420.340; -; 1.
DR Gene3D; 3.40.1440.10; -; 1.
DR HAMAP; MF_00203; UvrC; 1.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR001943; UVR_dom.
DR InterPro; IPR036876; UVR_dom_sf.
DR InterPro; IPR004791; UvrC.
DR InterPro; IPR001162; UvrC_RNase_H_dom.
DR InterPro; IPR038476; UvrC_RNase_H_dom_sf.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF02151; UVR; 1.
DR Pfam; PF08459; UvrC_HhH_N; 1.
DR SMART; SM00465; GIYc; 1.
DR SMART; SM00278; HhH1; 2.
DR SUPFAM; SSF46600; SSF46600; 1.
DR SUPFAM; SSF47781; SSF47781; 1.
DR SUPFAM; SSF82771; SSF82771; 1.
DR TIGRFAMs; TIGR00194; uvrC; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
DR PROSITE; PS50151; UVR; 1.
DR PROSITE; PS50165; UVRC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA damage; DNA excision; DNA repair; Excision nuclease;
KW SOS response.
FT CHAIN 1..608
FT /note="UvrABC system protein C"
FT /id="PRO_1000099456"
FT DOMAIN 15..93
FT /note="GIY-YIG"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
FT DOMAIN 203..238
FT /note="UVR"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
SQ SEQUENCE 608 AA; 69139 MW; BB9D8362B9D7A015 CRC64;
MPPFDSKAFL LSVTHQPGVY RMYNAEAEVI YVGKAKDLKK RLSSYFRSNI PSEKTKALVT
HIAQIDVTVT HTETEALILE HNYIKQYLPK YNVLLRDDKS YPYIFISNHK HPRISIHRGT
KRKKGEYFGP YPDSGAVRDS LHLIQKLFPI RQCEDSVYAN RHRPCLMHQI GRCLAPCVKG
IISDEDYAEQ TEFIRLFLQG KDRQVIQSLV EQMEGASQAL NFEKAATIRD QIQSMRRVQE
QQYVSDESSD DLDVLGFTIE NGLACIHLLM IRHGKILGSR SFFPKIPAKT EKEEVFSSFL
TQYYLNHSQG RTIPNRVITS FEFESEGLEQ ALTELSGRKV LFQLNPKGMK GRYLKLADTN
ALSALTSKAN HKLTVYQRFK QLEEALSLAS IQRMECFDIS HTMGEKTVAS CVVFNQEGPV
KSEYRRYNIT GITGGDDYAA MAQVLERRYS KQLDIDKIPD IVFIDGGKGQ LNRAYDVIRQ
HWGDWPKRPL LLGIAKGVTR KHGLETLVKI TGEEFSMPSD SPALHLIQHI RDESHNHAIS
GHRAQRAKVR KTSTLQHIEG VGPKRRQALL QYLGGLQELK KASVEEISKV PGISRSLAEK
IQDALKQG