UVRC_FLAJ1
ID UVRC_FLAJ1 Reviewed; 597 AA.
AC A5FM03;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 12-JUN-2007, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203};
DE Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};
DE AltName: Full=Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203};
GN Name=uvrC {ECO:0000255|HAMAP-Rule:MF_00203}; OrderedLocusNames=Fjoh_0726;
OS Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC
OS 14942 / NCIMB 11054 / UW101) (Cytophaga johnsonae).
OC Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=376686;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101;
RX PubMed=19717629; DOI=10.1128/aem.01495-09;
RA McBride M.J., Xie G., Martens E.C., Lapidus A., Henrissat B., Rhodes R.G.,
RA Goltsman E., Wang W., Xu J., Hunnicutt D.W., Staroscik A.M., Hoover T.R.,
RA Cheng Y.Q., Stein J.L.;
RT "Novel features of the polysaccharide-digesting gliding bacterium
RT Flavobacterium johnsoniae as revealed by genome sequence analysis.";
RL Appl. Environ. Microbiol. 75:6864-6875(2009).
CC -!- FUNCTION: The UvrABC repair system catalyzes the recognition and
CC processing of DNA lesions. UvrC both incises the 5' and 3' sides of the
CC lesion. The N-terminal half is responsible for the 3' incision and the
CC C-terminal half is responsible for the 5' incision. {ECO:0000255|HAMAP-
CC Rule:MF_00203}.
CC -!- SUBUNIT: Interacts with UvrB in an incision complex.
CC {ECO:0000255|HAMAP-Rule:MF_00203}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00203}.
CC -!- SIMILARITY: Belongs to the UvrC family. {ECO:0000255|HAMAP-
CC Rule:MF_00203}.
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DR EMBL; CP000685; ABQ03761.1; -; Genomic_DNA.
DR RefSeq; WP_012022815.1; NZ_MUGZ01000001.1.
DR AlphaFoldDB; A5FM03; -.
DR SMR; A5FM03; -.
DR STRING; 376686.Fjoh_0726; -.
DR EnsemblBacteria; ABQ03761; ABQ03761; Fjoh_0726.
DR KEGG; fjo:Fjoh_0726; -.
DR eggNOG; COG0322; Bacteria.
DR HOGENOM; CLU_014841_3_2_10; -.
DR OMA; HIECFDN; -.
DR OrthoDB; 1036075at2; -.
DR Proteomes; UP000006694; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0009381; F:excinuclease ABC activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:UniProtKB-UniRule.
DR GO; GO:0009432; P:SOS response; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.420.340; -; 1.
DR Gene3D; 3.40.1440.10; -; 1.
DR HAMAP; MF_00203; UvrC; 1.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR001943; UVR_dom.
DR InterPro; IPR036876; UVR_dom_sf.
DR InterPro; IPR004791; UvrC.
DR InterPro; IPR001162; UvrC_RNase_H_dom.
DR InterPro; IPR038476; UvrC_RNase_H_dom_sf.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF08459; UvrC_HhH_N; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF46600; SSF46600; 1.
DR SUPFAM; SSF47781; SSF47781; 1.
DR SUPFAM; SSF82771; SSF82771; 1.
DR TIGRFAMs; TIGR00194; uvrC; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
DR PROSITE; PS50151; UVR; 1.
DR PROSITE; PS50165; UVRC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA damage; DNA excision; DNA repair; Excision nuclease;
KW SOS response.
FT CHAIN 1..597
FT /note="UvrABC system protein C"
FT /id="PRO_1000077785"
FT DOMAIN 15..93
FT /note="GIY-YIG"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
FT DOMAIN 207..242
FT /note="UVR"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
SQ SEQUENCE 597 AA; 68788 MW; CCB3DB31B179F2E5 CRC64;
MSKPSLDLQI LTLPDNPGVY QYYDKDGKIL YVGKAKNLKK RVSSYFNKIH DTAKTNVLVK
KIVTIKHIVV PTETDALLLE NNLIKTLQPR YNVLLRDDKS YPWICIKKEP FSRIFLTRRM
VKDGSEYFGP YTNFKMVYTI LDLIKELYPL RTCNYDLSQS NIDSGKFKVC LEYHIGNCKG
PCEGLEPLEE YQRQVNAIRE ILKGNFKESL KDFKKLMNNY AQNLQFEEAQ KIKEKIEVLE
NYQSRSTIVN PKITNIDVFS IISDESAAYV NFLQISHGSI IRSHTLEMKK KLDESDEELL
ELAIIELRER FQLMSKEIIV PFEIDLGENI KTTVPQLGDK KQILDLSIRN AKFYRIEQLK
QLQIVDPDRH VNRIMAQMQK DLRLPVEPRH IECFDNSNIQ GTNPVAACVV FKDGKPSKKD
YRHFNVKTVE GPDDFASMTE IVYRRYKRLL DENQPLPQLI IIDGGKGQLS SALKSIDELG
LRGKVAIIGI AKRLEELFYP GDSIPLYLDK KSETLKVIQQ LRNEAHRFGI TFHRDKRSKA
ALNSSVESIP GIGEKTMLTL IQHFKSVKRL KLATEKEISA VVGVSKAKKI VDFYKTN