UVRC_PELUB
ID UVRC_PELUB Reviewed; 611 AA.
AC Q4FPI1;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 30-AUG-2005, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203};
DE Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};
DE AltName: Full=Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203};
GN Name=uvrC {ECO:0000255|HAMAP-Rule:MF_00203}; OrderedLocusNames=SAR11_0084;
OS Pelagibacter ubique (strain HTCC1062).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales;
OC Pelagibacteraceae; Candidatus Pelagibacter.
OX NCBI_TaxID=335992;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HTCC1062;
RX PubMed=16109880; DOI=10.1126/science.1114057;
RA Giovannoni S.J., Tripp H.J., Givan S., Podar M., Vergin K.L., Baptista D.,
RA Bibbs L., Eads J., Richardson T.H., Noordewier M., Rappe M.S., Short J.M.,
RA Carrington J.C., Mathur E.J.;
RT "Genome streamlining in a cosmopolitan oceanic bacterium.";
RL Science 309:1242-1245(2005).
CC -!- FUNCTION: The UvrABC repair system catalyzes the recognition and
CC processing of DNA lesions. UvrC both incises the 5' and 3' sides of the
CC lesion. The N-terminal half is responsible for the 3' incision and the
CC C-terminal half is responsible for the 5' incision. {ECO:0000255|HAMAP-
CC Rule:MF_00203}.
CC -!- SUBUNIT: Interacts with UvrB in an incision complex.
CC {ECO:0000255|HAMAP-Rule:MF_00203}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00203}.
CC -!- SIMILARITY: Belongs to the UvrC family. {ECO:0000255|HAMAP-
CC Rule:MF_00203}.
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DR EMBL; CP000084; AAZ20908.1; -; Genomic_DNA.
DR RefSeq; WP_006997824.1; NC_007205.1.
DR AlphaFoldDB; Q4FPI1; -.
DR SMR; Q4FPI1; -.
DR STRING; 335992.SAR11_0084; -.
DR EnsemblBacteria; AAZ20908; AAZ20908; SAR11_0084.
DR GeneID; 66294587; -.
DR KEGG; pub:SAR11_0084; -.
DR eggNOG; COG0322; Bacteria.
DR HOGENOM; CLU_014841_3_0_5; -.
DR OMA; HIECFDN; -.
DR OrthoDB; 1036075at2; -.
DR Proteomes; UP000002528; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0009381; F:excinuclease ABC activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:UniProtKB-UniRule.
DR GO; GO:0009432; P:SOS response; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.420.340; -; 1.
DR Gene3D; 3.40.1440.10; -; 1.
DR HAMAP; MF_00203; UvrC; 1.
DR InterPro; IPR041663; DisA/LigA_HHH.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR001943; UVR_dom.
DR InterPro; IPR036876; UVR_dom_sf.
DR InterPro; IPR004791; UvrC.
DR InterPro; IPR001162; UvrC_RNase_H_dom.
DR InterPro; IPR038476; UvrC_RNase_H_dom_sf.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF12826; HHH_2; 1.
DR Pfam; PF02151; UVR; 1.
DR Pfam; PF08459; UvrC_HhH_N; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF46600; SSF46600; 1.
DR SUPFAM; SSF47781; SSF47781; 1.
DR SUPFAM; SSF82771; SSF82771; 1.
DR TIGRFAMs; TIGR00194; uvrC; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
DR PROSITE; PS50151; UVR; 1.
DR PROSITE; PS50165; UVRC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA damage; DNA excision; DNA repair; Excision nuclease;
KW Reference proteome; SOS response.
FT CHAIN 1..611
FT /note="UvrABC system protein C"
FT /id="PRO_0000227454"
FT DOMAIN 20..98
FT /note="GIY-YIG"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
FT DOMAIN 208..243
FT /note="UVR"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
SQ SEQUENCE 611 AA; 70057 MW; 9C093EC4488A00D4 CRC64;
MKSSELGKDV IRKELPLIPK SPGVYRMLDH KDVILYVGKA KNLPNRLKSY VAEKNHIIRT
ARMLSQTFKL EITTTANESE ALLLEANLIK KHKPKFNILL KDDKSFPFVF ISNKDQWAQV
TKHRGKKDKE GFYFGPFASA GTANWTIKML QKIFQIRVCD DSTFKNRKRP CILYQIKRCS
GPCVDYIDKE DYKKSVDQAI QFVSGKSRDI QKNLSKQMEE ASEKLDFERA SIFRDRIKSL
NIIQSSQRIN EANLIDADVI AAYKESGKTC IQVFFYRSKQ NWGNQAYFPK HDPDQSLSEI
MSSFLMQFYE NKNVPKLIII NTEIEDKKLI EETLSKKENS AISINVAKKG TKAKVIAMAE
KNAKESLNRK IYETNNNKNL FEGVAKKFDL KNGLNLVEVY DNSHISGTNS VGAMITFGNE
GFVKKRYRKF DIKTKGNEQD DFAMLKEVLT RRFKRAMLEK GNYLTLPDLI LIDGGKGQYS
SAKEVLDEFG LHDLPMIAIA KGKLRNSGDE TFFYKGKSFK FDKNDPTLFF MQRLRDEAHR
FAITSHRAKR AKGITKSLLD QIDGIGSIRK RALLNHFGSA RAVESASFDE IKSVEGVEEK
VAKKIYNFFH E