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UVRC_PELUB
ID   UVRC_PELUB              Reviewed;         611 AA.
AC   Q4FPI1;
DT   07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT   30-AUG-2005, sequence version 1.
DT   03-AUG-2022, entry version 94.
DE   RecName: Full=UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203};
DE            Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};
DE   AltName: Full=Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203};
GN   Name=uvrC {ECO:0000255|HAMAP-Rule:MF_00203}; OrderedLocusNames=SAR11_0084;
OS   Pelagibacter ubique (strain HTCC1062).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales;
OC   Pelagibacteraceae; Candidatus Pelagibacter.
OX   NCBI_TaxID=335992;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HTCC1062;
RX   PubMed=16109880; DOI=10.1126/science.1114057;
RA   Giovannoni S.J., Tripp H.J., Givan S., Podar M., Vergin K.L., Baptista D.,
RA   Bibbs L., Eads J., Richardson T.H., Noordewier M., Rappe M.S., Short J.M.,
RA   Carrington J.C., Mathur E.J.;
RT   "Genome streamlining in a cosmopolitan oceanic bacterium.";
RL   Science 309:1242-1245(2005).
CC   -!- FUNCTION: The UvrABC repair system catalyzes the recognition and
CC       processing of DNA lesions. UvrC both incises the 5' and 3' sides of the
CC       lesion. The N-terminal half is responsible for the 3' incision and the
CC       C-terminal half is responsible for the 5' incision. {ECO:0000255|HAMAP-
CC       Rule:MF_00203}.
CC   -!- SUBUNIT: Interacts with UvrB in an incision complex.
CC       {ECO:0000255|HAMAP-Rule:MF_00203}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00203}.
CC   -!- SIMILARITY: Belongs to the UvrC family. {ECO:0000255|HAMAP-
CC       Rule:MF_00203}.
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DR   EMBL; CP000084; AAZ20908.1; -; Genomic_DNA.
DR   RefSeq; WP_006997824.1; NC_007205.1.
DR   AlphaFoldDB; Q4FPI1; -.
DR   SMR; Q4FPI1; -.
DR   STRING; 335992.SAR11_0084; -.
DR   EnsemblBacteria; AAZ20908; AAZ20908; SAR11_0084.
DR   GeneID; 66294587; -.
DR   KEGG; pub:SAR11_0084; -.
DR   eggNOG; COG0322; Bacteria.
DR   HOGENOM; CLU_014841_3_0_5; -.
DR   OMA; HIECFDN; -.
DR   OrthoDB; 1036075at2; -.
DR   Proteomes; UP000002528; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0009380; C:excinuclease repair complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0009381; F:excinuclease ABC activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006289; P:nucleotide-excision repair; IEA:UniProtKB-UniRule.
DR   GO; GO:0009432; P:SOS response; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.420.340; -; 1.
DR   Gene3D; 3.40.1440.10; -; 1.
DR   HAMAP; MF_00203; UvrC; 1.
DR   InterPro; IPR041663; DisA/LigA_HHH.
DR   InterPro; IPR000305; GIY-YIG_endonuc.
DR   InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR001943; UVR_dom.
DR   InterPro; IPR036876; UVR_dom_sf.
DR   InterPro; IPR004791; UvrC.
DR   InterPro; IPR001162; UvrC_RNase_H_dom.
DR   InterPro; IPR038476; UvrC_RNase_H_dom_sf.
DR   Pfam; PF01541; GIY-YIG; 1.
DR   Pfam; PF12826; HHH_2; 1.
DR   Pfam; PF02151; UVR; 1.
DR   Pfam; PF08459; UvrC_HhH_N; 1.
DR   SMART; SM00465; GIYc; 1.
DR   SUPFAM; SSF46600; SSF46600; 1.
DR   SUPFAM; SSF47781; SSF47781; 1.
DR   SUPFAM; SSF82771; SSF82771; 1.
DR   TIGRFAMs; TIGR00194; uvrC; 1.
DR   PROSITE; PS50164; GIY_YIG; 1.
DR   PROSITE; PS50151; UVR; 1.
DR   PROSITE; PS50165; UVRC; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; DNA damage; DNA excision; DNA repair; Excision nuclease;
KW   Reference proteome; SOS response.
FT   CHAIN           1..611
FT                   /note="UvrABC system protein C"
FT                   /id="PRO_0000227454"
FT   DOMAIN          20..98
FT                   /note="GIY-YIG"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
FT   DOMAIN          208..243
FT                   /note="UVR"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00203"
SQ   SEQUENCE   611 AA;  70057 MW;  9C093EC4488A00D4 CRC64;
     MKSSELGKDV IRKELPLIPK SPGVYRMLDH KDVILYVGKA KNLPNRLKSY VAEKNHIIRT
     ARMLSQTFKL EITTTANESE ALLLEANLIK KHKPKFNILL KDDKSFPFVF ISNKDQWAQV
     TKHRGKKDKE GFYFGPFASA GTANWTIKML QKIFQIRVCD DSTFKNRKRP CILYQIKRCS
     GPCVDYIDKE DYKKSVDQAI QFVSGKSRDI QKNLSKQMEE ASEKLDFERA SIFRDRIKSL
     NIIQSSQRIN EANLIDADVI AAYKESGKTC IQVFFYRSKQ NWGNQAYFPK HDPDQSLSEI
     MSSFLMQFYE NKNVPKLIII NTEIEDKKLI EETLSKKENS AISINVAKKG TKAKVIAMAE
     KNAKESLNRK IYETNNNKNL FEGVAKKFDL KNGLNLVEVY DNSHISGTNS VGAMITFGNE
     GFVKKRYRKF DIKTKGNEQD DFAMLKEVLT RRFKRAMLEK GNYLTLPDLI LIDGGKGQYS
     SAKEVLDEFG LHDLPMIAIA KGKLRNSGDE TFFYKGKSFK FDKNDPTLFF MQRLRDEAHR
     FAITSHRAKR AKGITKSLLD QIDGIGSIRK RALLNHFGSA RAVESASFDE IKSVEGVEEK
     VAKKIYNFFH E
 
 
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