VCL21_ARATH
ID VCL21_ARATH Reviewed; 707 AA.
AC F4IQK5; Q9ZU69;
DT 20-JAN-2016, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 25-MAY-2022, entry version 65.
DE RecName: Full=Vicilin-like seed storage protein At2g18540;
DE AltName: Full=Globulin At2g18540;
DE Flags: Precursor;
GN OrderedLocusNames=At2g18540 {ECO:0000312|Araport:AT2G18540};
GN ORFNames=F24H14.11 {ECO:0000312|EMBL:AAD12213.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|Proteomes:UP000006548};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=12417707; DOI=10.1105/tpc.005009;
RA Gruis D.F., Selinger D.A., Curran J.M., Jung R.;
RT "Redundant proteolytic mechanisms process seed storage proteins in the
RT absence of seed-type members of the vacuolar processing enzyme family of
RT cysteine proteases.";
RL Plant Cell 14:2863-2882(2002).
CC -!- FUNCTION: Seed storage protein. {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the 7S seed storage protein family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD12213.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC006135; AAD12213.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC06779.1; -; Genomic_DNA.
DR PIR; E84565; E84565.
DR RefSeq; NP_179444.2; NM_127410.3.
DR AlphaFoldDB; F4IQK5; -.
DR STRING; 3702.AT2G18540.1; -.
DR PaxDb; F4IQK5; -.
DR PRIDE; F4IQK5; -.
DR ProMEX; F4IQK5; -.
DR ProteomicsDB; 243226; -.
DR EnsemblPlants; AT2G18540.1; AT2G18540.1; AT2G18540.
DR GeneID; 816369; -.
DR Gramene; AT2G18540.1; AT2G18540.1; AT2G18540.
DR KEGG; ath:AT2G18540; -.
DR Araport; AT2G18540; -.
DR TAIR; locus:2046273; AT2G18540.
DR eggNOG; ENOG502QS4V; Eukaryota.
DR HOGENOM; CLU_027536_1_0_1; -.
DR InParanoid; F4IQK5; -.
DR PRO; PR:F4IQK5; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; F4IQK5; baseline and differential.
DR Gene3D; 2.60.120.10; -; 2.
DR InterPro; IPR006045; Cupin_1.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR Pfam; PF00190; Cupin_1; 1.
DR SMART; SM00835; Cupin_1; 2.
DR SUPFAM; SSF51182; SSF51182; 1.
PE 3: Inferred from homology;
KW Coiled coil; Glycoprotein; Reference proteome; Signal.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..707
FT /note="Vicilin-like seed storage protein At2g18540"
FT /evidence="ECO:0000255"
FT /id="PRO_5003309527"
FT DOMAIN 42..185
FT /note="Cupin type-1 1"
FT /evidence="ECO:0000255"
FT DOMAIN 247..403
FT /note="Cupin type-1 2"
FT /evidence="ECO:0000255"
FT REGION 439..707
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 60
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 203
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 285
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 356
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 396
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 399
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 707 AA; 84769 MW; 35F6DD2C53EB324D CRC64;
MSRFRILPLS IFLCFVSLFF CTESFTHQNG VVPSFDPSYS SPLLVKKDQR TSVVATEFGN
ISAVQIGDGY HIQFITLEPN ALLLPLLLHS DMVFFVHTGT GILNWIDEES ERKLELRRGD
VFRLRSGTVF YVHSNEKLRV YAIFNVGKCL NDPCLGAYSS VRDLLLGFDD RTLRSAFAVP
EDILRKIRDA TKPPLIVNAL PRNRTQGLEE DKWQSRLVRL FVSVEDVTDH LAMKPIVDTN
KKKSRTFNVF EEDPDFENNN GRSIVVDEKD LDALKGSRFG VFMVNLTKGS MIGPHWNPSA
CEISIVLEGE GMVRVVNQQS LSSCKNDRKS ESFMVEEGDV FVVPKFHPMA QMSFENSSFV
FMGFSTSAKT NHPQFLVGQS SVLKVLDRDV VAVSFNLSNE TIKGLLKAQK ESVIFECASC
AEGELSKLMR EIEERKRREE EEIERRRKEE EEARKREEAK RREEEEAKRR EEEETERKKR
EEEEARKREE ERKREEEEAK RREEERKKRE EEAEQARKRE EEREKEEEMA KKREEERQRK
EREEVERKRR EEQERKRREE EARKREEERK REEEMAKRRE QERQRKEREE VERKIREEQE
RKREEEMAKR REQERQKKER EEMERKKREE EARKREEEMA KIREEERQRK EREDVERKRR
EEEAMRREEE RKREEEAAKR AEEERRKKEE EEEKRRWPPQ PKPPEEI
