VDAC_CAEEL
ID VDAC_CAEEL Reviewed; 283 AA.
AC Q21752;
DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
DT 27-MAY-2002, sequence version 2.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=Probable voltage-dependent anion-selective channel;
GN Name=vdac-1 {ECO:0000312|WormBase:R05G6.7};
GN ORFNames=R05G6.7 {ECO:0000312|WormBase:R05G6.7};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=25190516; DOI=10.15252/embj.201489039;
RA Ackema K.B., Hench J., Boeckler S., Wang S.C., Sauder U., Mergentaler H.,
RA Westermann B., Bard F., Frank S., Spang A.;
RT "The small GTPase Arf1 modulates mitochondrial morphology and function.";
RL EMBO J. 33:2659-2675(2014).
CC -!- FUNCTION: Forms a channel through the cell membrane that allows
CC diffusion of small hydrophilic molecules (By similarity). Plays a role
CC in maintaining mitochondrial morphology (PubMed:25190516).
CC {ECO:0000250|UniProtKB:P21796, ECO:0000269|PubMed:25190516}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion outer membrane
CC {ECO:0000250|UniProtKB:P21796}; Multi-pass membrane protein
CC {ECO:0000250|UniProtKB:P21796}.
CC -!- DOMAIN: Consists mainly of membrane-spanning sided beta-sheets.
CC {ECO:0000250|UniProtKB:P21796}.
CC -!- DISRUPTION PHENOTYPE: RNAi-mediated knockdown results in a hyper-
CC connected mitochondrial network in body wall muscle cells.
CC {ECO:0000269|PubMed:25190516}.
CC -!- SIMILARITY: Belongs to the eukaryotic mitochondrial porin family.
CC {ECO:0000305}.
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DR EMBL; BX284604; CCD71556.1; -; Genomic_DNA.
DR PIR; T29355; T29355.
DR RefSeq; NP_501211.1; NM_068810.5.
DR AlphaFoldDB; Q21752; -.
DR SMR; Q21752; -.
DR BioGRID; 42642; 34.
DR IntAct; Q21752; 1.
DR STRING; 6239.R05G6.7; -.
DR EPD; Q21752; -.
DR PaxDb; Q21752; -.
DR PeptideAtlas; Q21752; -.
DR EnsemblMetazoa; R05G6.7.1; R05G6.7.1; WBGene00019900.
DR GeneID; 177524; -.
DR KEGG; cel:CELE_R05G6.7; -.
DR UCSC; R05G6.7.1; c. elegans.
DR CTD; 177524; -.
DR WormBase; R05G6.7; CE29443; WBGene00019900; vdac-1.
DR eggNOG; KOG3126; Eukaryota.
DR GeneTree; ENSGT00950000182869; -.
DR HOGENOM; CLU_044399_2_0_1; -.
DR InParanoid; Q21752; -.
DR OMA; ITLTEKW; -.
DR OrthoDB; 938262at2759; -.
DR PhylomeDB; Q21752; -.
DR Reactome; R-CEL-5205685; PINK1-PRKN Mediated Mitophagy.
DR Reactome; R-CEL-70268; Pyruvate metabolism.
DR PRO; PR:Q21752; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00019900; Expressed in embryo and 4 other tissues.
DR GO; GO:0005741; C:mitochondrial outer membrane; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; IDA:WormBase.
DR GO; GO:0046930; C:pore complex; IEA:UniProtKB-KW.
DR GO; GO:0015288; F:porin activity; IEA:UniProtKB-KW.
DR GO; GO:0008308; F:voltage-gated anion channel activity; IBA:GO_Central.
DR GO; GO:0007005; P:mitochondrion organization; IMP:WormBase.
DR GO; GO:0042048; P:olfactory behavior; IMP:WormBase.
DR CDD; cd07306; Porin3_VDAC; 1.
DR Gene3D; 2.40.160.10; -; 1.
DR InterPro; IPR023614; Porin_dom_sf.
DR InterPro; IPR001925; Porin_Euk.
DR InterPro; IPR027246; Porin_Euk/Tom40.
DR InterPro; IPR030277; VDAC2.
DR PANTHER; PTHR11743; PTHR11743; 1.
DR PANTHER; PTHR11743:SF12; PTHR11743:SF12; 1.
DR Pfam; PF01459; Porin_3; 1.
DR PRINTS; PR00185; EUKARYTPORIN.
PE 3: Inferred from homology;
KW Ion transport; Membrane; Mitochondrion; Mitochondrion outer membrane;
KW Porin; Reference proteome; Transmembrane; Transmembrane beta strand;
KW Transport.
FT CHAIN 1..283
FT /note="Probable voltage-dependent anion-selective channel"
FT /id="PRO_0000050521"
SQ SEQUENCE 283 AA; 29961 MW; 060141EEA5060290 CRC64;
MAPPTFADLG KSAKDLFNKG YNFGFLKIDS TTRAGDNKEV EFKSAASHNI GSGKLGGNLD
VKYKIPQYGI TLTEKWNTEN QLGTVIEVNE QFGRGLKVTL DSLYAPHAGK RSGKVKLDWA
LPTARVTADV GVTSAPVINA AGVFSRDGWL IGAAATFDSS SNKLAATSLA FGHSTPQYTL
HSFVINSTDF GASLYHKVAS NVEVGTQLGW KVGGNGADYA LATKYAPSRD LTVRAKVNSS
SQVAVAATHS LSPALKLTLS TQFNLAANDA HKFGLGLEFD PSN