VEGT_XENBO
ID VEGT_XENBO Reviewed; 454 AA.
AC Q98UD2;
DT 15-DEC-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=T-box protein VegT {ECO:0000250|UniProtKB:P87377, ECO:0000312|EMBL:AAK00596.1};
GN Name=vegt {ECO:0000312|EMBL:AAK00596.1};
OS Xenopus borealis (Kenyan clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8354;
RN [1] {ECO:0000312|EMBL:AAK00596.1}
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Bubunenko M., Vempati U.D., King M.L.;
RT "Characterization of the RNA signal that directs vegetal localization of
RT VegT, the primary germ layer determinant in Xenopus.";
RL Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor required for both mesoderm and endoderm
CC formation in the embryo; signaling determinants and concentration
CC levels may determine which germ layer is formed. Acts together with
CC beta-catenin to activate genes that are responsible for mesoderm
CC induction including wnt-8, eomes t/bra, siamois, mix1 and sox17.
CC Directly binds to promoter DNA. Patterns the mesoderm along the
CC dorsoventral and posterior axis. Activates siamois gene transcription
CC when alone or in combination with beta-catenin, but inhibits siamois
CC transcription in combination with pou5f1.1/oct-25 (By similarity).
CC {ECO:0000250|UniProtKB:P87377}.
CC -!- SUBUNIT: Forms a repression complex on the promoters of the nodal/nr1
CC and siamois genes with the maternal factors tcf7l1/tcf3 and
CC pouf5.1/oct-25. Interacts (via C-terminus) with tcf7l1/tcf3 (via N-
CC terminus). Also interacts with the other POU-domain transcription
CC factors pou5f1.2/oct-91 and pou5f1.3/oct-60 (By similarity).
CC {ECO:0000250|UniProtKB:P87377}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P87377,
CC ECO:0000255|PROSITE-ProRule:PRU00201}.
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DR EMBL; AF180351; AAK00596.1; -; mRNA.
DR AlphaFoldDB; Q98UD2; -.
DR SMR; Q98UD2; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd00182; TBOX; 1.
DR Gene3D; 2.60.40.820; -; 1.
DR InterPro; IPR008967; p53-like_TF_DNA-bd.
DR InterPro; IPR046360; T-box_DNA-bd.
DR InterPro; IPR036960; T-box_sf.
DR InterPro; IPR001699; TF_T-box.
DR InterPro; IPR018186; TF_T-box_CS.
DR PANTHER; PTHR11267; PTHR11267; 2.
DR Pfam; PF00907; T-box; 1.
DR PRINTS; PR00937; TBOX.
DR SMART; SM00425; TBOX; 1.
DR SUPFAM; SSF49417; SSF49417; 1.
DR PROSITE; PS01283; TBOX_1; 1.
DR PROSITE; PS01264; TBOX_2; 1.
DR PROSITE; PS50252; TBOX_3; 1.
PE 2: Evidence at transcript level;
KW Activator; Developmental protein; DNA-binding; Nucleus; Transcription;
KW Transcription regulation.
FT CHAIN 1..454
FT /note="T-box protein VegT"
FT /id="PRO_0000390493"
FT DNA_BIND 57..230
FT /note="T-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00201"
FT REGION 229..274
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 295..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 229..244
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 251..274
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 295..339
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 454 AA; 51855 MW; 4623D860475AD6AC CRC64;
MRNCCRERGF SVGCLEPETS FSCASDVKPS PDMDSVSSQD SLYLPNSIGA SLQDQDLWSQ
FHQEGTEMII TKSGRRMFPQ CKIRLFGLHL YAKYMLLVDF VPLDNFRYKW NKNQWEAAGK
AEPHPPCRTY VHPDSPASGA HWMKDPICFQ KLKLTNNTLD QQGHIILHSM HRYKPRFHVV
QSDDMYNSPW GLVQVFSFPE TEFTAVTAYQ NEKITKLKIN HNPFAKGFRE QERSHKRDDV
LRTLQQSPGK RQKRKKWEDS PEADISDFPK ATRVKEESVM DPAVVYQNWV SDHEANQGLT
PHSPESEGVN QEQQVPTSSL NFYNKSQHRS SQHLSSPYDL GEPSSRRLTP DVATVPDSDQ
DSLAVLHGIP TQDSAQERTC SMNISMETPV KQPLRGTIYS SYGTEQWMVP AQGQYQPVGY
TAYQTDLSTQ GAVAHQHSGM SDWSQYSLFP YSCW